RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 BTG2P78543 158 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 TEKQ02763 1124 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 VWA2Q5GFL6 755 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 FAM69AQ5T7M9 428 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 FAM205BPQ63HN1 556 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 AWAT2Q6E213 333 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 OR52I1Q8NGK6 324 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 GAB3Q8WWW8 586 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 DUSP21Q9H596 190 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 TMPRSS11EQ9UL52 423 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 B3GNT3Q9Y2A9 372 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 CABIN1Q9Y6J0 2220 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 TMEM72A0PK05 275 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 MRPS10P82664 201 aaKnown RBP12.73□□□□□ -0.37
BRAT1-203ENST00000467558 MARCH3Q86UD3 253 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 OR8H3Q8N146 312 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 OR2A14Q96R47 310 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 SLC25A18Q9H1K4 315 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 ATP13A2Q9NQ11 1180 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 KCNIP3Q9Y2W7 256 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 NPFFR2Q9Y5X5 522 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
BRAT1-203ENST00000467558 ARRDC5A6NEK1 342 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 MBTPS2O43462 519 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 OR7A10O76100 309 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 OR8G3PP0DMU2 310 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 TMEM225BP0DP42 221 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 BMP1P13497 986 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 RBMXP38159 391 aaKnown RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 EPHA4P54764 986 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 WNT3P56703 355 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 YBX1P67809 324 aaKnown RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 RAE1P78406 368 aaKnown RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 SYT14P1Q58G82 188 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 KCTD9Q7L273 389 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 GRINAQ7Z429 371 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 LRRC28Q86X40 367 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 MSRB3Q8IXL7 192 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 RCBTB1Q8NDN9 531 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 OR52N1Q8NH53 320 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 C16orf52Q8NHV5 167 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 KCTD12Q96CX2 325 aaKnown RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 ULBP2Q9BZM5 246 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 POLHQ9Y253 713 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 GGT3PA6NGU5 568 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 ZAR1LA6NP61 321 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 MT-ATP6P00846 226 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 THBS2P35442 1172 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 GPR3P46089 330 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 SLC26A5P58743 744 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 EXT1Q16394 746 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 BCDIN3DQ7Z5W3 292 aaKnown RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 SFTPA1Q8IWL2 248 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 OR5D14Q8NGL3 314 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 TCEAL2Q9H3H9 227 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 ACAD8Q9UKU7 415 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 SEC16AO15027 2179 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 K7EQS6 105 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 DSCR3O14972 297 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 PIP5K1CO60331 668 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 CREBL2O60519 120 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 PIPP12273 146 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 AMY2BP19961 511 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 DPP4P27487 766 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 SLC14A1Q13336 389 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 FAHD1Q6P587 224 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 A8MV72 311 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-203ENST00000467558 TCN2P20062 427 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 AKIRIN2Q53H80 203 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 BCORP1Q8N888 145 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 OR5J2Q8NH18 312 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 GHSRQ92847 366 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 LRRC3BQ96PB8 259 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 CSF3RQ99062 836 aa12.72□□□□□ -0.37
BRAT1-203ENST00000467558 RAB3AP20336 220 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 VAMP2P63027 116 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 SLC35A1P78382 337 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 CTU2Q2VPK5 515 aaKnown RBP12.71□□□□□ -0.37
BRAT1-203ENST00000467558 SFRP4Q6FHJ7 346 aaPredicted RBP12.71□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF620Q6ZNG0 422 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 DCDC5Q6ZRR9 648 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 CLDN22Q8N7P3 220 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 HMGCLL1Q8TB92 370 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF566Q969W8 418 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 SLC25A44Q96H78 314 aaPredicted RBP12.71□□□□□ -0.37
BRAT1-203ENST00000467558 NUDT22Q9BRQ3 303 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 CENPOQ9BU64 300 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 SYT4Q9H2B2 425 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 MRPL15Q9P015 296 aaKnown RBP12.71□□□□□ -0.37
BRAT1-203ENST00000467558 PRAMEF25A6NGN4 478 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 H7C1C5 153 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF593O00488 134 aaPredicted RBP12.71□□□□□ -0.37
BRAT1-203ENST00000467558 LCN6P62502 163 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 RSU1Q15404 277 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 DPY19L4Q7Z388 723 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 ABHD12BQ7Z5M8 362 aaPredicted RBP12.71□□□□□ -0.37
BRAT1-203ENST00000467558 TMEM179BQ7Z7N9 219 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 BPHLQ86WA6 291 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms