RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 FAM71CQ8NEG0 241 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 OR56A1Q8NGH5 318 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 OR5P2Q8WZ92 322 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 ST8SIA1Q92185 356 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 MTERF3Q96E29 417 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 PIMREGQ9BSJ6 248 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 THTPAQ9BU02 230 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 BPESC1Q9GZL8 116 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 SEC61A2Q9H9S3 476 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 ACER3Q9NUN7 267 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 EMC3Q9P0I2 261 aa13.68□□□□□ -0.22
SND1-203ENST00000463020 FAF1Q9UNN5 650 aaPredicted RBP13.68□□□□□ -0.22
SND1-203ENST00000463020 NUP214P35658 2090 aaPredicted RBP13.68□□□□□ -0.22
SND1-203ENST00000463020 PKD1L1Q8TDX9 2849 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 E9PBE3 544 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 KIAA0513O60268 411 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 CSTAP01040 98 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 TGFAP01135 160 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 CSF3P09919 207 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 COX4I1P13073 169 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 CCNA2P20248 432 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 HPCAL1P37235 193 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 ASMTP46597 345 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 CSNK2A1P68400 391 aaPredicted RBP13.67□□□□□ -0.22
SND1-203ENST00000463020 HBA1P69905 142 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 LGALS3BPQ08380 585 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 FUT5Q11128 374 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 SLC9B1Q4ZJI4 515 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 CASP12Q6UXS9 341 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 RNF165Q6ZSG1 346 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 ADGRG3Q86Y34 549 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 DDIASQ8IXT1 998 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 CLECL1Q8IZS7 167 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 AGR3Q8TD06 166 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 TWIST2Q8WVJ9 160 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 ZG16BQ96DA0 208 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 PLA2G12AQ9BZM1 189 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 BHLHE41Q9C0J9 482 aaPredicted RBP13.67□□□□□ -0.22
SND1-203ENST00000463020 NDE1Q9NXR1 346 aa13.67□□□□□ -0.22
SND1-203ENST00000463020 IGHV1-18A0A0C4DH31 117 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 AP3D1O14617 1153 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 ENTPD5O75356 428 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 MRPL33O75394 65 aaKnown RBP13.66□□□□□ -0.22
SND1-203ENST00000463020 PMS2P2O95744 297 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 PGRP06401 933 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 IMPDH2P12268 514 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 RYKP34925 604 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 NAA20P61599 178 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 H3F3AP84243 136 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 CHRNB3Q05901 458 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 KPNB1Q14974 876 aaKnown RBP13.66□□□□□ -0.22
SND1-203ENST00000463020 ATP6AP1LQ52LC2 224 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 XKR7Q5GH72 579 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 NXNQ6DKJ4 435 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 SSX8Q7RTT4 187 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 R3HCC1LQ7Z5L2 792 aaKnown RBP13.66□□□□□ -0.22
SND1-203ENST00000463020 RIMKLAQ8IXN7 391 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 SFXN5Q8TD22 340 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 COQ8BQ96D53 544 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 RSRC1Q96IZ7 334 aaKnown RBP13.66□□□□□ -0.22
SND1-203ENST00000463020 ZNF350Q9GZX5 532 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 CHRNA9Q9UGM1 479 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 ZDHHC2Q9UIJ5 367 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 TMED5Q9Y3A6 229 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 FLVCR1Q9Y5Y0 555 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 PMF1-BGLAPU3KQ54 211 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 MGAM2Q2M2H8 2515 aa13.66□□□□□ -0.22
SND1-203ENST00000463020 ZC3H12DA2A288 527 aaKnown RBP13.65□□□□□ -0.22
SND1-203ENST00000463020 PRAMEF27A3QJZ7 478 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 IGFBP1P08833 259 aaPredicted RBP13.65□□□□□ -0.22
SND1-203ENST00000463020 ZNF23P17027 643 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 CDH2P19022 906 aaPredicted RBP13.65□□□□□ -0.22
SND1-203ENST00000463020 SOAT1P35610 550 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 OR2B6P58173 313 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 ZSWIM7Q19AV6 140 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 LSM12Q3MHD2 195 aaKnown RBP13.65□□□□□ -0.22
SND1-203ENST00000463020 OR7E24Q6IFN5 339 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 TYW3Q6IPR3 259 aaKnown RBP13.65□□□□□ -0.22
SND1-203ENST00000463020 C16orf89Q6UX73 402 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 MYPOPQ86VE0 399 aaPredicted RBP13.65□□□□□ -0.22
SND1-203ENST00000463020 DEPDC4Q8N2C3 294 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 ZCCHC24Q8N2G6 241 aaKnown RBP13.65□□□□□ -0.22
SND1-203ENST00000463020 ZIC4Q8N9L1 334 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 RP9Q8TA86 221 aaKnown RBP13.65□□□□□ -0.22
SND1-203ENST00000463020 PIGXQ8TBF5 258 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 OR52B2Q96RD2 323 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 NUF2Q9BZD4 464 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 HEATR1Q9H583 2144 aaKnown RBP13.65□□□□□ -0.22
SND1-203ENST00000463020 SERINC1Q9NRX5 453 aa13.65□□□□□ -0.22
SND1-203ENST00000463020 TMEM72A0PK05 275 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 FKBP6O75344 327 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 PGCP20142 388 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 MATN1P21941 496 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 CFPP27918 469 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 TUBA1BP68363 451 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 TUBA4AP68366 448 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 MAPRE2Q15555 327 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 ADIPOQQ15848 244 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 PDCD2Q16342 344 aaPredicted RBP13.64□□□□□ -0.23
SND1-203ENST00000463020 ARHGAP11BQ3KRB8 267 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms