RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MAD2L1BPQ15013 274 aaPredicted RBP16.47■□□□□ 0.23
HMGN1-206ENST00000431390 TMEM44Q2T9K0 475 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 FAM69AQ5T7M9 428 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 C1orf140Q5VVS0 124 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 C3orf33Q6P1S2 294 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 CASP12Q6UXS9 341 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 ENTHD1Q8IYW4 607 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 SLC25A43Q8WUT9 341 aaPredicted RBP16.47■□□□□ 0.23
HMGN1-206ENST00000431390 DDIT4LQ96D03 193 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 C5orf34Q96MH7 638 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 TSSK6Q9BXA6 273 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 YTHDF1Q9BYJ9 559 aaKnown RBP16.47■□□□□ 0.23
HMGN1-206ENST00000431390 PRRG3Q9BZD7 231 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 NANSQ9NR45 359 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 IMPAD1Q9NX62 359 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 ZNF229Q9UJW7 825 aa16.47■□□□□ 0.23
HMGN1-206ENST00000431390 ZC3H12DA2A288 527 aaKnown RBP16.46■□□□□ 0.23
HMGN1-206ENST00000431390 AHSA1O95433 338 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 BGLAPP02818 100 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 LYNP07948 512 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 ASAH2BP0C7U1 165 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 RPS5P46782 204 aaKnown RBP16.46■□□□□ 0.23
HMGN1-206ENST00000431390 RPS4XP62701 263 aaKnown RBP16.46■□□□□ 0.23
HMGN1-206ENST00000431390 TEKQ02763 1124 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 SELENBP1Q13228 472 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 CTU2Q2VPK5 515 aaKnown RBP16.46■□□□□ 0.23
HMGN1-206ENST00000431390 C10orf53Q8N6V4 93 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 OR2T33Q8NG76 320 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 OR51A7Q8NH64 312 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 TRUB1Q8WWH5 349 aaKnown RBP16.46■□□□□ 0.23
HMGN1-206ENST00000431390 TAAR8Q969N4 342 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 SCMH1Q96GD3 660 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 SAMD8Q96LT4 415 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 PTDSS2Q9BVG9 487 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 TEX12Q9BXU0 123 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 POTEKPQ9BYX7 375 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 UBQLN3Q9H347 655 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 MCCC2Q9HCC0 563 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 RNF6Q9Y252 685 aa16.46■□□□□ 0.23
HMGN1-206ENST00000431390 TRAV27A0A087WT01 109 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 PINLYPA6NC86 204 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 SHISA8B8ZZ34 492 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 LRRN3E7EW58 273 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 KLRC4-KLRK1H3BQV0 150 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 ZIC3O60481 467 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 ITGB2P05107 769 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 LTBQ06643 244 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 CDK5R2Q13319 367 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 PGGHGQ32M88 737 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 ACSM5Q6NUN0 579 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 SULF2Q8IWU5 870 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 ZNF786Q8N393 782 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 IQCF1Q8N6M8 205 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 RHOXF1Q8NHV9 184 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 HDAC2Q92769 488 aaKnown RBP16.45■□□□□ 0.22
HMGN1-206ENST00000431390 MOGAT1Q96PD6 335 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 TNFRSF13CQ96RJ3 184 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 SMAD5Q99717 465 aaKnown RBP16.45■□□□□ 0.22
HMGN1-206ENST00000431390 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.45■□□□□ 0.22
HMGN1-206ENST00000431390 ZNF226Q9NYT6 803 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 BAIAP2Q9UQB8 552 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 MYRFQ9Y2G1 1151 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 HIF3AQ9Y2N7 669 aa16.45■□□□□ 0.22
HMGN1-206ENST00000431390 PTPN13Q12923 2485 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 EFNA2O43921 213 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 NDUFB2O95178 105 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 TSPAN19P0C672 248 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 GABRB1P18505 474 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 SLC6A6P31641 620 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 CLK1P49759 484 aaKnown RBP16.44■□□□□ 0.22
HMGN1-206ENST00000431390 TNFSF10P50591 281 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 PRPS1P60891 318 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 SRSF1Q07955 248 aaKnown RBP eCLIP16.44■□□□□ 0.22
HMGN1-206ENST00000431390 MFSD13AQ14CX5 517 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 SYT14P1Q58G82 188 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 CLEC12AQ5QGZ9 265 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 C6orf141Q5SZD1 244 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 MAMDC2Q7Z304 686 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-206ENST00000431390 LRRC17Q8N6Y2 441 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 TMEM178AQ8NBL3 297 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 OR4Q3Q8NH05 313 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 SLC38A2Q96QD8 506 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 PIGQQ9BRB3 760 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 POLDIP3Q9BY77 421 aaKnown RBP16.44■□□□□ 0.22
HMGN1-206ENST00000431390 HES7Q9BYE0 225 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 OR2B2Q9GZK3 357 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 OR11A1Q9GZK7 315 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 ZNF696Q9H7X3 374 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 B4GALT7Q9UBV7 327 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 NCKAP5O14513 1909 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 DOPEY2Q9Y3R5 2298 aa16.44■□□□□ 0.22
HMGN1-206ENST00000431390 BHLHE40O14503 412 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 FZD7O75084 574 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 HIST1H2ABP04908 130 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 HMGN1P05114 100 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 IL11P20809 199 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 GRK5P34947 590 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 CXCR4P61073 352 aa16.43■□□□□ 0.22
HMGN1-206ENST00000431390 SNRPGP62308 76 aaKnown RBP16.43■□□□□ 0.22
HMGN1-206ENST00000431390 TOP3AQ13472 1001 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms