RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CCDC77Q9BR77 488 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF385DQ9H6B1 395 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 VCPKMTQ9H867 229 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 METTL7AQ9H8H3 244 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 WDR76Q9H967 626 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 LRRC40Q9H9A6 602 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 HOXC10Q9NYD6 342 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 GNG12Q9UBI6 72 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 SF3B1O75533 1304 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 PHLPP2Q6ZVD8 1323 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 PTCH1Q13635 1447 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 C15orf38-AP3S2A0A0A6YYH1 394 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 IGHV3-64DA0A0J9YX35 117 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 MAPK13O15264 365 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 MAGEB4O15481 346 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZSCAN12O43309 604 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 OR1F1O43749 312 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 TPST2O60704 377 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 UFL1O94874 794 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 CSF2P04141 144 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 FGF4P08620 206 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 CHTF8P0CG12 524 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 HNF1AP20823 631 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 ATP6V1B2P21281 511 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 PRDX3P30048 256 aaKnown RBP2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 PTGDSP41222 190 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 OR1G1P47890 313 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 RGS4P49798 205 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 PLK1P53350 603 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 AIF1P55008 147 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 NUCB2P80303 420 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 PLD1Q13393 1074 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 ARFRP1Q13795 201 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 IDI1Q13907 227 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 GGTA1PQ4G0N0 100 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 LRRC23Q53EV4 343 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 HSP90AB3PQ58FF7 597 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 C1orf100Q5SVJ3 147 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 CTRB2Q6GPI1 263 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 PYHIN1Q6K0P9 492 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 PMF1Q6P1K2 205 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 CLEC2AQ6UVW9 174 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 MFSD6LQ8IWD5 586 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 FAM3CQ92520 227 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 RAPGEF5Q92565 580 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 SLC41A3Q96GZ6 507 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 TIMD4Q96H15 378 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 KCNA7Q96RP8 456 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 CCNL2Q96S94 520 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF670Q9BS34 389 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 ALG12Q9BV10 488 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 CAPS2Q9BXY5 557 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 SLC25A22Q9H936 323 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 NTN4Q9HB63 628 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 FARSBQ9NSD9 589 aaKnown RBP2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 HYPKQ9NX55 129 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 PSG11Q9UQ72 335 aa2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 CAB39Q9Y376 341 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P49-201ENST00000418882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.59□□□□□ -2
HMGB1P49-201ENST00000418882 FRMPD3Q5JV73 1810 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.58□□□□□ -2
HMGB1P49-201ENST00000418882 GOLGA6L7A0A1B0GV03 622 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 SERTM2A0A1B0GWG4 89 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 A6NIZ1 184 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 FAM25EA8MYX2 175 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 TCP11X1B4DZS4 312 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 E9PBE3 544 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 TMX2-CTNND1H3BSU7 103 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 MED7O43513 233 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 B4GALT2O60909 372 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 ZNF324O75467 553 aaPredicted RBP2.58□□□□□ -2
HMGB1P49-201ENST00000418882 CTAG2O75638 210 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 UGT2B17O75795 530 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 ZNF44P15621 663 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 UQCRC2P22695 453 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 CRISP3P54108 245 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 KRTAP10-10P60014 251 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 ACTR3P61158 418 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 RAP1BP61224 184 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 PJVKQ0ZLH3 352 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 PTGES3Q15185 160 aaKnown RBP2.58□□□□□ -2
HMGB1P49-201ENST00000418882 FAM71F2Q6NXP2 309 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 C16orf87Q6PH81 154 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 OR4D9Q8NGE8 314 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 PLA2G2FQ9BZM2 168 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 YY1AP1Q9H869 796 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 RAB18Q9NP72 206 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 PRPF19Q9UMS4 504 aaKnown RBP2.58□□□□□ -2
HMGB1P49-201ENST00000418882 CHMP2BQ9UQN3 213 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 MRPS33Q9Y291 106 aaKnown RBP2.58□□□□□ -2
HMGB1P49-201ENST00000418882 ASF1AQ9Y294 204 aa2.58□□□□□ -2
HMGB1P49-201ENST00000418882 IGKV2D-24A0A075B6R9 120 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 ARPC4-TTLL3A0A0A6YYG9 625 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 A0A1B0GUS0 222 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 GOLGA8OA6NCC3 632 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 HELTA6NFD8 242 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 FAM47DPA6NHR8 397 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 GOLGA8NF8WBI6 632 aa2.57□□□□□ -2
HMGB1P49-201ENST00000418882 H0YC42 278 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms