RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 TAS2R13Q9NYV9 303 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 TAS2R3Q9NYW6 316 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SLC25A37Q9NYZ2 338 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 METTL1Q9UBP6 276 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 RPS6KB2Q9UBS0 482 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 SIX4Q9UIU6 781 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 CRYL1Q9Y2S2 319 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 EXOSC1Q9Y3B2 195 aaKnown RBP5.02□□□□□ -1.61
CLK1-202ENST00000409403 SLC22A7Q9Y694 548 aa5.02□□□□□ -1.61
CLK1-202ENST00000409403 MYO18AQ92614 2054 aaKnown RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 MUC22E2RYF6 1773 aaPredicted RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 COL6A6A6NMZ7 2263 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 PLXNB3Q9ULL4 1909 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 NBPF19A0A087WUL8 3843 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 CCDC187A0A096LP49 1063 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 LINC00473A8K010 186 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 C5orf67F2Z3F1 127 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 H0YIZ8 118 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 M0QZQ0 153 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 LGALS8O00214 317 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 RFXANKO14593 260 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SLC31A2O15432 143 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SMAD6O43541 496 aaKnown RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 LRP3O75074 770 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 NIPSNAP2O75323 286 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 REM1O75628 298 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 OAZ2O95190 189 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 ADAP00813 363 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 TFP02787 698 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 ALDOBP05062 364 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 NNMTP40261 264 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 TNFSF9P41273 254 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SLC1A3P43003 542 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 RGS4P49798 205 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 DIO1P49895 249 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 RAB5CP51148 216 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 CRISP3P54108 245 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 WNT4P56705 351 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 RAB2AP61019 212 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SEC61A1P61619 476 aaKnown RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 RPL38P63173 70 aaKnown RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 SPIBQ01892 262 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 LRRC74AQ0VAA2 488 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 ILF3Q12906 894 aaKnown RBP eCLIP5.01□□□□□ -1.611e-7■■■■■ 26.8
CLK1-202ENST00000409403 CAPSQ13938 189 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SGCAQ16586 387 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 TMEM44Q2T9K0 475 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SGO1Q5FBB7 561 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 STPG1Q5TH74 334 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 LIPKQ5VXJ0 399 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 KIAA1161Q6NSJ0 714 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 CD200R1LQ6Q8B3 271 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 CASP12Q6UXS9 341 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 DEF8Q6ZN54 512 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 Q6ZSR9 355 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SYT13Q7L8C5 426 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 VRK3Q8IV63 474 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 CPOQ8IVL8 374 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SFTPA1Q8IWL2 248 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 OR6V1Q8N148 313 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 PYROXD2Q8N2H3 581 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 PGBD5Q8N414 524 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SLC5A8Q8N695 610 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 NAXEQ8NCW5 288 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 DBF4BQ8NFT6 615 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 OR8J1Q8NGP2 316 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 OR52P1PQ8NH57 321 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SMAP2Q8WU79 429 aaPredicted RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 PCNPQ8WW12 178 aaKnown RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 NPIPB3Q92617 1050 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 TMEM143Q96AN5 459 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 EXOSC8Q96B26 276 aaKnown RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 PHYHIPLQ96FC7 376 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 CDKN2AIPNLQ96HQ2 116 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 PGLYRP2Q96PD5 576 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SSX3Q99909 188 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 ATF6BQ99941 703 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 EDEM2Q9BV94 578 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 DUSP16Q9BY84 665 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 TMPRSS5Q9H3S3 457 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 OSGEPL1Q9H4B0 414 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 ACTL8Q9H568 366 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 XKR8Q9H6D3 395 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 METTL17Q9H7H0 456 aaPredicted RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 CHODLQ9H9P2 273 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 RNF122Q9H9V4 155 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 SAP30LQ9HAJ7 183 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 CACYBPQ9HB71 228 aaKnown RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 TMEM138Q9NPI0 162 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 THSD1Q9NS62 852 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 ADAMTS5Q9UNA0 930 aa5.01□□□□□ -1.61
CLK1-202ENST00000409403 EXO1Q9UQ84 846 aaKnown RBP5.01□□□□□ -1.61
CLK1-202ENST00000409403 A0A1W2PRB8 838 aa5□□□□□ -1.61
CLK1-202ENST00000409403 FAM90A20PA6NIJ5 464 aa5□□□□□ -1.61
CLK1-202ENST00000409403 ANXA2P2A6NMY6 339 aa5□□□□□ -1.61
CLK1-202ENST00000409403 EFCAB7A8K855 629 aa5□□□□□ -1.61
CLK1-202ENST00000409403 AGAP14A8MT82 685 aa5□□□□□ -1.61
CLK1-202ENST00000409403 SNRPGP15A8MWD9 76 aa5□□□□□ -1.61
CLK1-202ENST00000409403 ZNF879B4DU55 563 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms