RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SFTPA1Q8IWL2 248 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 CFAP206Q8IYR0 622 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 CBARPQ8N350 705 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 IQCF1Q8N6M8 205 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 OR4K5Q8NGD3 323 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 RNASE11Q8TAA1 199 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 RAB40AQ8WXH6 277 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 ZFP3Q96NJ6 502 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 CAMK1GQ96NX5 476 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 ZNF607Q96SK3 696 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 TEAD3Q99594 435 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 C1orf198Q9H425 327 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 CCDC86Q9H6F5 360 aaKnown RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 MYNNQ9NPC7 610 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 MMP26Q9NRE1 261 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 MAN2C1Q9NTJ4 1040 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 ARL15Q9NXU5 204 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 NKIRAS2Q9NYR9 191 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 TAS2R8Q9NYW2 309 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 RHCGQ9UBD6 479 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 PCDHB10Q9UN67 800 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 RCE1Q9Y256 329 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 SPTBN2O15020 2390 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 TP53BP1Q12888 1972 aaPredicted RBP9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 CACNA1AO00555 2505 aa9.81□□□□□ -0.84
NIF3L1-204ENST00000409357 BPTFQ12830 3046 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ACOT7O00154 380 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 TERTO14746 1132 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SURF4O15260 269 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 LAMTOR5O43504 91 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 KDELR3O43731 214 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 GFRA3O60609 400 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 PRAMEF4O60810 478 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SH3BGRLO75368 114 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 PRKRAO75569 313 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 PCDH8O95206 1070 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 LATS1O95835 1130 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 IGLV3-27P01718 113 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 MT-ND5P03915 603 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 FURINP09958 794 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ACP5P13686 325 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ZNF44P15621 663 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ZNF8P17098 575 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 HOXD9P28356 352 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 MAS1LP35410 378 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 CEACAM6P40199 344 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 OPRD1P41143 372 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SCAND1P57086 179 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 RAB2AP61019 212 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 BLOC1S1P78537 153 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SIM1P81133 766 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 DMWDQ09019 674 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 CHIT1Q13231 466 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 RBMS2Q15434 407 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 HMGN3Q15651 99 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SLC5A12Q1EHB4 618 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ATP13A5Q4VNC0 1218 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 TMEM244Q5VVB8 128 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 PRAMEF9Q5VWM5 478 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 APOOLQ6UXV4 268 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 REC114Q7Z4M0 266 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 OR5W2Q8NH69 310 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ECHDC3Q96DC8 303 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 NEURL3Q96EH8 262 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 PFDN5Q99471 154 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 TIMP4Q99727 224 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 MESP1Q9BRJ9 268 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 C2orf88Q9BSF0 95 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 TNFSF18Q9UNG2 199 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SCML2Q9UQR0 700 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 PCDHGA5Q9Y5G8 931 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 POMT1Q9Y6A1 747 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SPAG17Q6Q759 2223 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 A0A1W2PQH9 124 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 TTLL8A6PVC2 850 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 WASH3PC4AMC7 463 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 AKR7A3O95154 331 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 IRF1P10914 325 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 HPGDP15428 266 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 HLA-GP17693 338 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ATF1P18846 271 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 XPAP23025 273 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ACRV1P26436 265 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 BDKRB2P30411 391 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SDHAP31040 664 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 RAB5CP51148 216 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SSBP1Q04837 148 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ZNF763Q0D2J5 394 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 PDGFRLQ15198 375 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 CSRP2Q16527 193 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 LINC00303Q3SY05 128 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 KLHL26Q53HC5 615 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 VWA2Q5GFL6 755 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 TMEM196Q5HYL7 178 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 ACER2Q5QJU3 275 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 DMRTA1Q5VZB9 504 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 DMKNQ6E0U4 476 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 IL20RBQ6UXL0 311 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 NHLRC1Q6VVB1 395 aa9.8□□□□□ -0.84
NIF3L1-204ENST00000409357 SSX9Q7RTT3 188 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms