RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SPATA2Q9UM82 520 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 SPACA6W5XKT8 324 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 H0YC42 278 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 NTN3O00634 580 aaPredicted RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 DHFRP00374 187 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ZNF806P0C7X5 589 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 JMJD7P0C870 316 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 APEHP13798 732 aaKnown RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 NID1P14543 1247 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 CALCRP30988 508 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 OMPP47874 163 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 AFF3P51826 1226 aaKnown RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 CRISP1P54107 249 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ZXDAP98168 799 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 DUSP2Q05923 314 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 GGTLC2Q14390 218 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 PPA1Q15181 289 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 POM121L1PQ3SYA9 428 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 PABPC1L2AQ5JQF8 200 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 PGBD2Q6P3X8 592 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 BRICD5Q6PL45 260 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 TMEM91Q6ZNR0 172 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 PRICKLE2Q7Z3G6 844 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 LUZP2Q86TE4 346 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 STPG2Q8N412 459 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 OR9Q2Q8NGE9 314 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 CA5BP1Q8WTZ4 195 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ARSGQ96EG1 525 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 SLC38A2Q96QD8 506 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ZNF436Q9C0F3 470 aaPredicted RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 OR51J1Q9H342 316 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 OR51I1Q9H343 314 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 IMP3Q9NV31 184 aaKnown RBP4.93□□□□□ -1.62
VPS41-203ENST00000395969 PLAGL1Q9UM63 463 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 SLC9A8Q9Y2E8 581 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 ZNF780BQ9Y6R6 833 aa4.93□□□□□ -1.62
VPS41-203ENST00000395969 FEZF1A0PJY2 475 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 PQLC2LA1A4F0 135 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 OR6C65A6NJZ3 312 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 OR52A4PA6NMU1 304 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 EFCAB7A8K855 629 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 M0R233 179 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 SOX1O00570 391 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 GPR171O14626 319 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ERI3O43414 337 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 KDM4BO94953 1096 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 NMBP08949 121 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CELA3AP09093 270 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 TFPIP10646 304 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CBR1P16152 277 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 DNASE1P24855 282 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ACTR1BP42025 376 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 BLVRAP53004 296 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 RAG2P55895 527 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CLDN2P57739 230 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ACTR1AP61163 376 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 HHEXQ03014 270 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 TSPAN31Q12999 210 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 TPBGQ13641 420 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 C1DQ13901 141 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 SF1Q15637 639 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 SLC23A3Q6PIS1 610 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 PAQR6Q6TCH4 344 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 HSD17B13Q7Z5P4 300 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 MAML2Q8IZL2 1156 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 LNX2Q8N448 690 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 BVESQ8NE79 360 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 OR4D9Q8NGE8 314 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 GNPDA2Q8TDQ7 276 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 HSD17B8Q92506 261 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 BCL2L14Q9BZR8 327 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 INPP5EQ9NRR6 644 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 COMMD3Q9UBI1 195 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ING1Q9UK53 422 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 TMEM5Q9Y2B1 443 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 NUBP2Q9Y5Y2 271 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 LOC102723996A0A087X1L8 192 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 TCRBV16S1A1N1A0A5B0 115 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CDHR4A6H8M9 788 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 FRG2CA6NGY1 282 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ZNF891A8MT65 544 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 AIPO00170 330 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 PGRMC2O15173 223 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 LANCL1O43813 399 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 SLC19A2O60779 497 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ATG12O94817 140 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CBX7O95931 251 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 IGHMP01871 453 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 APOC3P02656 99 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ACP2P11117 423 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CHI3L1P36222 383 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 IFNGR2P38484 337 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 FNTBP49356 437 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CDH12P55289 794 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ZP1P60852 638 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 RPS25P62851 125 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 SPIBQ01892 262 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 PLAURQ03405 335 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CRYZQ08257 329 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 SLC25A53Q5H9E4 307 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms