RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 OR2M5A3KFT3 312 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 EIF4E1BA6NMX2 242 aaKnown RBP18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 SMNDC1O75940 238 aaKnown RBP eCLIP18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 IDUAP35475 653 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 PRPS1P60891 318 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 PLGLB1Q02325 96 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 SNAPC1Q16533 368 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 ANKDD1AQ495B1 522 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 LRRC69Q6ZNQ3 347 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 YRDCQ86U90 279 aaKnown RBP18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 FAM83FQ8NEG4 500 aaPredicted RBP18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 OR6S1Q8NH40 331 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 RHOXF1Q8NHV9 184 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 HDAC2Q92769 488 aaKnown RBP18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 IL4I1Q96RQ9 567 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 TTTY12Q9BZ98 90 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 HIF3AQ9Y2N7 669 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 CSAG2Q9Y5P2 127 aa18.42■□□□□ 0.54
VCPKMT-202ENST00000395860 CELSR3Q9NYQ7 3312 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 BHLHE40O14503 412 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 FMO3P31513 532 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 RPL4P36578 427 aaKnown RBP18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 RFC3P40938 356 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 PCYT1AP49585 367 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 TLE3Q04726 772 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 SLC6A19Q695T7 634 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 TCEANCQ8N8B7 351 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 MFSD8Q8NHS3 518 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 APH1BQ8WW43 257 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 TRUB1Q8WWH5 349 aaKnown RBP18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 TAPBPLQ9BX59 468 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 POLDIP3Q9BY77 421 aaKnown RBP18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 OR2B2Q9GZK3 357 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 ZNF703Q9H7S9 590 aaPredicted RBP18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 BAIAP2Q9UQB8 552 aa18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 TNRC6AQ8NDV7 1962 aaKnown RBP18.41■□□□□ 0.54
VCPKMT-202ENST00000395860 OPN1LWP04000 364 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 HMGN1P05114 100 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 GABRB1P18505 474 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 GTF2E2P29084 291 aaKnown RBP18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 GRPRP30550 384 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 GRK5P34947 590 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 SFTPDP35247 375 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 MFSD13AQ14CX5 517 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 OR7A5Q15622 319 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 RBM48Q5RL73 367 aaKnown RBP18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 LAIR2Q6ISS4 152 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 CCDC103Q8IW40 242 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 LNX2Q8N448 690 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 OR8J1Q8NGP2 316 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 OR5J2Q8NH18 312 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 PLEKHA8Q96JA3 519 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 ASPNQ9BXN1 380 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 YTHDF1Q9BYJ9 559 aaKnown RBP18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 SPTBN4Q9H254 2564 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 MCIDASD6RGH6 385 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 FTCDNL1E5RQL4 147 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 PRKYO43930 277 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 WBP4O75554 376 aaKnown RBP18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 PPP1R3DO95685 299 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 UQCRC1P31930 480 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 AQP2P41181 271 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 CLK1P49759 484 aaKnown RBP18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 MLLT10P55197 1068 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 MYBPHQ13203 477 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 TOP3AQ13472 1001 aaPredicted RBP18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 TMEM176BQ3YBM2 270 aaPredicted RBP18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 WIPI1Q5MNZ9 446 aaPredicted RBP18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 IGFN1Q86VF2 1251 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 BPIFB6Q8NFQ5 453 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 MOSPD2Q8NHP6 518 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 TM9SF4Q92544 642 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 OR5B2Q96R09 309 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 NDEL1Q9GZM8 345 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 ZNF696Q9H7X3 374 aa18.4■□□□□ 0.54
VCPKMT-202ENST00000395860 FAM166BA8MTA8 275 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 K7ENP7 123 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 SURF4O15260 269 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 TLX2O43763 284 aaPredicted RBP18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 IMPDH2P12268 514 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 B3GALT5-AS1P59052 145 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 SNRPGP62308 76 aaKnown RBP18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 RPL18Q07020 188 aaKnown RBP18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 SGCBQ16585 318 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 ALG10Q5BKT4 473 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 INO80CQ6PI98 192 aaPredicted RBP18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 DPY19L2P2Q6ZN68 376 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 SFXN2Q96NB2 322 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 CLN6Q9NWW5 311 aa18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 PCDHGA9Q9Y5G4 932 aaKnown RBP18.39■□□□□ 0.53
VCPKMT-202ENST00000395860 A0A1W2PNR3 127 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 SLC1A7O00341 560 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 SHC1P29353 583 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 NOS3P29474 1203 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 CXCR4P61073 352 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 FOXK2Q01167 660 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 TEKQ02763 1124 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 PMS2P3Q13401 168 aa18.38■□□□□ 0.53
VCPKMT-202ENST00000395860 SMN1Q16637 294 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms