RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 UBQLN2Q9UHD9 624 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 YBX2Q9Y2T7 364 aaKnown RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 BCAS1O75363 584 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 GRB2P62993 217 aaKnown RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 SF3A2Q15428 464 aaKnown RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 NKAIN2Q5VXU1 208 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 ASTLQ6HA08 431 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 LRRC28Q86X40 367 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 NRG4Q8WWG1 115 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 TTC9Q92623 222 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 MYEOVQ96EZ4 313 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 COG8Q96MW5 612 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 SYT4Q9H2B2 425 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 DHCR7Q9UBM7 475 aaKnown RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 PSORS1C1Q9UIG5 152 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 TSPAN12O95859 305 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 GASTP01350 101 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 IL32P24001 234 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 ERV3-1Q14264 604 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 FCRL6Q6DN72 434 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 SLC16A14Q7RTX9 510 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF285Q96NJ3 590 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 KCNG2Q9UJ96 466 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 NPFFR2Q9Y5X5 522 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM269A0A1B0GVZ9 245 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 FRG2CA6NGY1 282 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 IL7P13232 177 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 LINC00299Q6ZSB3 139 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 OR51T1Q8NGJ9 327 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 RASD1Q9Y272 281 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 CCDC187A0A096LP49 1063 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 hCG_1807616A0A1W2PRN6 198 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM127O75204 238 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 UBCP0CG48 685 aaKnown RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 DAPP51397 102 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 CARD18P57730 90 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 C1orf140Q5VVS0 124 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 ETFBKMTQ8IXQ9 262 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 HMGCLL1Q8TB92 370 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 ITPKCQ96DU7 683 aa10.56□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF764Q96H86 408 aaPredicted RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 YARS2Q9Y2Z4 477 aaKnown RBP10.56□□□□□ -0.72
COL4A5-201ENST00000328300 H3BMQ9 156 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 RP2O75695 350 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 HTR3BO95264 441 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 POU3F3P20264 500 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-201ENST00000328300 SLC1A3P43003 542 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 PRKXP51817 358 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 PGAP1Q75T13 922 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 H1FNTQ75WM6 255 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-201ENST00000328300 MKXQ8IYA7 352 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 CMTM1Q8IZ96 169 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 PIAS4Q8N2W9 510 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-201ENST00000328300 OR13C2Q8NGS9 318 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 OR2A1Q8NGT9 310 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 C4orf36Q96KX1 117 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 SGCZQ96LD1 299 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM185BQ9H7F4 350 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 NOSIPQ9Y314 301 aaKnown RBP10.55□□□□□ -0.72
COL4A5-201ENST00000328300 A0A1W2PPC1 479 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 A0A1W2PR48 441 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 LCKP06239 509 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 SELENBP1Q13228 472 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 CPEB2Q7Z5Q1 589 aaKnown RBP10.55□□□□□ -0.72
COL4A5-201ENST00000328300 RADILQ96JH8 1075 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 FBXL3Q9UKT7 428 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 KCNS2Q9ULS6 477 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 C13orf42A0A1B0GVH6 325 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 FUOMA2VDF0 154 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF814B7Z6K7 855 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 UBBP0CG47 229 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 RHEBQ15382 184 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 KDM4DQ6B0I6 523 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 KCTD9Q7L273 389 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 ALG12Q9BV10 488 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF471Q9BX82 626 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-201ENST00000328300 A3GALT2U3KPV4 340 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 TRAV6A0A075B6T7 132 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 PLSCR5A0PG75 271 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 P2RX6O15547 441 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 SCGB1D2O95969 90 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 IFNA5P01569 189 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 CHRM4P08173 479 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 AKAIN1P0CW23 69 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 CD53P19397 219 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 NR4A2P43354 598 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 MTNR1BP49286 362 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 FOXK2Q01167 660 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 EMX1Q04741 257 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-201ENST00000328300 GSG1LQ6UXU4 331 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 GOT1L1Q8NHS2 421 aaPredicted RBP10.55□□□□□ -0.72
COL4A5-201ENST00000328300 CACNG6Q9BXT2 260 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 EBF1Q9UH73 591 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 SLC35F4A4IF30 521 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 ARSBP15848 533 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 PTBP1P26599 531 aaKnown RBP eCLIP10.55□□□□□ -0.72
COL4A5-201ENST00000328300 HOXD12P35452 270 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 PLK5Q496M5 336 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM31Q5JXX7 168 aa10.55□□□□□ -0.72
COL4A5-201ENST00000328300 RAB11FIP2Q7L804 512 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms