RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PDLIM3Q53GG5 364 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF610Q8N9Z0 462 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SCLYQ96I15 445 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ALOXE3Q9BYJ1 711 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 OR11A1Q9GZK7 315 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 BCAS3Q9H6U6 928 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 UBQLN4Q9NRR5 601 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TRBV4-1A0A0J9YWV2 114 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 HSPB2A8KAH6 182 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 DFFBO76075 338 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 JUNDP17535 347 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 IDUAP35475 653 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TSFMP43897 325 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 GIPRP48546 466 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ZXDBP98169 803 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 HSPB2Q16082 182 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM59Q9BXS4 323 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 WDR76Q9H967 626 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 AGPAT2O15120 278 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ICMTO60725 284 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TNFRSF1BP20333 461 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 GABRR1P24046 479 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 RPS25P62851 125 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ZMAT1Q5H9K5 638 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 LYSMD2Q8IV50 215 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF595Q8IYB9 648 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 OR1S2Q8NGQ3 325 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF778Q96MU6 729 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SYT17Q9BSW7 474 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 METTL9Q9H1A3 318 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 NENFQ9UMX5 172 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 LOC105369274A0A096LPK9 316 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TMX2-CTNND1H3BSU7 103 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 OR2F2O95006 317 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 FPR3P25089 353 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 RPS15P62841 145 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 OR2F1Q13607 317 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 DPY19L2P2Q6ZN68 376 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 NAA40Q86UY6 237 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 OR4N4Q8N0Y3 316 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 NPLOC4Q8TAT6 608 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 MARC2Q969Z3 335 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 UBXN10Q96LJ8 280 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF75AQ96N20 296 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TAS2R16Q9NYV7 291 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TRAPPC2LH3BP13 241 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SULT2B1O00204 365 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 CSO75390 466 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 CPNE6O95741 557 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 HLA-DOBP13765 273 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 GM2AP17900 193 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 ELAVL4P26378 380 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 MAGEB1P43366 347 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TGM4P49221 684 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 FAM69BQ5VUD6 431 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TANGO2Q6ICL3 276 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 MEX3BQ6ZN04 569 aaKnown RBP7.13□□□□□ -1.27
SF3B3-201ENST00000302516 TCEAL8Q8IYN2 117 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SLC22A24Q8N4F4 322 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SHISA4Q96DD7 197 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 POFUT1Q9H488 388 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 MUTYHQ9UIF7 546 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 KPTNQ9Y664 436 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 SCN1AP35498 2009 aa7.13□□□□□ -1.27
SF3B3-201ENST00000302516 MTCL1Q9Y4B5 1905 aaKnown RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 TRPM6Q9BX84 2022 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 OTOL1A6NHN0 477 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 NPIPB15A6NHN6 443 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 NTSR1P30989 418 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 HTR6P50406 440 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 SORDQ00796 357 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 ACY1Q03154 408 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 C15orf54Q8N8G6 183 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 SGCZQ96LD1 299 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 KCNJ15Q99712 375 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 OCSTAMPQ9BR26 566 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 GCM1Q9NP62 436 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CLDND1Q9NY35 253 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 MYOTQ9UBF9 498 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 CHRNA9Q9UGM1 479 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 GPR160Q9UJ42 338 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RAB22AQ9UL26 194 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 DAPP51397 102 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 EMP2P54851 167 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 HBA1P69905 142 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 NNATQ16517 81 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 OR4N5Q8IXE1 308 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 DNAJC5GQ8N7S2 189 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RAB3CQ96E17 227 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 RNF32Q9H0A6 362 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF223Q9UK11 482 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-201ENST00000302516 NPFFR2Q9Y5X5 522 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 NPIPA7E9PJI5 369 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 NPIPA8P0DM63 369 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 LAP3P28838 519 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 GCH1P30793 250 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 SLC14A1Q13336 389 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 PLGLAQ15195 96 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 WDR5BQ86VZ2 330 aa7.12□□□□□ -1.27
SF3B3-201ENST00000302516 SDR9C7Q8NEX9 313 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms