RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 C1orf140Q5VVS0 124 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 C12orf73Q69YU5 71 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 ZNF544Q6NX49 715 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 MARCH9Q86YJ5 346 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 OR8H2Q8N162 312 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 NDNFQ8TB73 568 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 SPACA9Q96E40 222 aaPredicted RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 KTI12Q96EK9 354 aaPredicted RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 ALG8Q9BVK2 526 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 INIPQ9NRY2 104 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 MED17Q9NVC6 651 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 LAMP5Q9UJQ1 280 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 YARS2Q9Y2Z4 477 aaKnown RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 DNAH14Q0VDD8 3507 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 TRAV36DV7A0A075B6V5 113 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 FAM25AB3EWG3 89 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 FAM25CB3EWG5 89 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 FAM25GB3EWG6 89 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 SURF4O15260 269 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 TLX3O43711 291 aaPredicted RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 CDRT1O95170 752 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 CELA2AP08217 269 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 CD14P08571 375 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 CLUP10909 449 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 DPP4P27487 766 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 KRR1Q13601 381 aaKnown RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 DNASE1L3Q13609 305 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 ATP1A4Q13733 1029 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 C22orf42Q6IC83 251 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 TMPRSS11FQ6ZWK6 438 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 COX15Q7KZN9 410 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 YIPF7Q8N8F6 280 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 OR1J4Q8NGS1 313 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 OR2T4Q8NH00 348 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 SPRYD4Q8WW59 207 aaPredicted RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 ADIPOR1Q96A54 375 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 DHRS1Q96LJ7 313 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 KCTD7Q96MP8 289 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 RBP7Q96R05 134 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 CNN2Q99439 309 aaKnown RBP8.5□□□□□ -1.05
SSR3-201ENST00000265044 PRSS27Q9BQR3 290 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 TGIF2Q9GZN2 237 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 P4HTMQ9NXG6 502 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 KLHL21Q9UJP4 597 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 TCFL5Q9UL49 500 aa8.5□□□□□ -1.05
SSR3-201ENST00000265044 DNAJC13O75165 2243 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 A0A1W2PPK0 400 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 SULT2B1O00204 365 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 TMCC2O75069 709 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 ZNF806P0C7X5 589 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 JUNBP17275 347 aaPredicted RBP8.49□□□□□ -1.05
SSR3-201ENST00000265044 MYL9P24844 172 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 EDNRAP25101 427 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 ETV5P41161 510 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 POU3F1Q03052 451 aaPredicted RBP8.49□□□□□ -1.05
SSR3-201ENST00000265044 SPCS2Q15005 226 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 SYT6Q5T7P8 510 aaPredicted RBP8.49□□□□□ -1.05
SSR3-201ENST00000265044 XAF1Q6GPH4 301 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 CD300LDQ6UXZ3 194 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 ZNF433Q8N7K0 673 aaPredicted RBP8.49□□□□□ -1.05
SSR3-201ENST00000265044 LSMEM1Q8N8F7 131 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 NLGN4YQ8NFZ3 816 aaPredicted RBP8.49□□□□□ -1.05
SSR3-201ENST00000265044 OR6N1Q8NGY5 312 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 SMAP2Q8WU79 429 aaPredicted RBP8.49□□□□□ -1.05
SSR3-201ENST00000265044 THAP4Q8WY91 577 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 SEMA4CQ9C0C4 833 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 SLC25A19Q9HC21 320 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 TIMMDC1Q9NPL8 285 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 SEC14L4Q9UDX3 406 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 CHRNA9Q9UGM1 479 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 J3QRK9 145 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 GALR2O43603 387 aaPredicted RBP8.49□□□□□ -1.05
SSR3-201ENST00000265044 CLPXO76031 633 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 SNX4O95219 450 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 HLA-DPB1P04440 258 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 KRT8P05787 483 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 HTR1AP08908 422 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 SPARCP09486 303 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 GRK5P34947 590 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 ENTPD1P49961 510 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 LSAMPQ13449 338 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 TP53I3Q53FA7 332 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 DPY19L2P2Q6ZN68 376 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 NUBPLQ8TB37 319 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 CT55Q8WUE5 264 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 TSSK2Q96PF2 358 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 RASL10BQ96S79 203 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 TEAD3Q99594 435 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 SYT4Q9H2B2 425 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 ABCB10Q9NRK6 738 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 CMC2Q9NRP2 79 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 TNRC18O15417 2968 aaPredicted RBP8.49□□□□□ -1.05
SSR3-201ENST00000265044 LY6G6EA0A0G2JKS1 128 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 ZNF670-ZNF695F2Z2N8 137 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 M0R082 166 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 THY1P04216 161 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 MSL3P1P0C860 447 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 ACP1P24666 158 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 HTR1FP30939 366 aa8.49□□□□□ -1.05
SSR3-201ENST00000265044 NOVA1P51513 510 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms