RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 GPR32O75388 356 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 HPNP05981 417 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 HOXD12P35452 270 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SOX10P56693 466 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 POM121L1PQ3SYA9 428 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 EDARADDQ8WWZ3 215 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 DLL4Q9NR61 685 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 NECAP2Q9NVZ3 263 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FAM198AQ9UFP1 575 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SLC9B1P1A6NJY1 282 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SNRPGP15A8MWD9 76 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 BUD23O43709 281 aaKnown RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 HTR5AP47898 357 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OR10K2Q6IF99 312 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 CDH26Q8IXH8 852 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 PRR22Q8IZ63 422 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SMPDL3BQ92485 455 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 GCM1Q9NP62 436 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 AMBNQ9NP70 447 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TRDV1A0A1B0GX56 115 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FAM166BA8MTA8 275 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 NAGAP17050 411 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 DPP4P27487 766 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 CSNK1A1P48729 337 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 RELAQ04206 551 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ACSM1Q08AH1 577 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OR6K3Q8NGY3 331 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TIMM29Q9BSF4 260 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ABHD6Q9BV23 337 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 NMNAT1Q9HAN9 279 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OR2S2Q9NQN1 319 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 A8MUI8 341 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 M0R3H8 397 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 GIPP09681 153 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 PAX6P26367 422 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 HLA-DMAP28067 261 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 LSSP48449 732 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SULT1A2P50226 295 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 GLYR1Q49A26 553 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OPN5Q6U736 354 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 KIAA1958Q8N8K9 716 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 LPPQ93052 612 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM18Q96B42 140 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TCTN2Q96GX1 697 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 TBX5Q99593 518 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 DPH2Q9BQC3 489 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 SMDT1Q9H4I9 107 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FZD3Q9NPG1 666 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 F2P00734 622 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 POU4F3Q15319 338 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 ACOT6Q3I5F7 207 aaPredicted RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FRMD1Q8N878 549 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 OR5T1Q8NG75 326 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 FAM110BQ8TC76 370 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 DDX4Q9NQI0 724 aaKnown RBP5.69□□□□□ -1.5
VPS13D-201ENST00000011700 HES2Q9Y543 173 aa5.69□□□□□ -1.5
VPS13D-201ENST00000011700 IGKV6D-41A0A0C4DH26 115 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TCRBV3S1A0A5B6 114 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF891A8MT65 544 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF705FA8MVS1 300 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SEC14L6B5MCN3 397 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TNFRSF10AO00220 468 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 GABRPO00591 440 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 PIRO00625 290 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF705DP0CH99 300 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF705BP0CI00 300 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ENPP1P22413 925 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CCNOP22674 350 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 AADACP22760 399 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 NR0B1P51843 470 aaKnown RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 PHYHD1Q5SRE7 291 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF852Q6ZMS4 543 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 COMMD6Q7Z4G1 85 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 OR6M1Q8NGM8 313 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SLC17A5Q9NRA2 495 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 NDRG4Q9ULP0 352 aaKnown RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 YIPF1Q9Y548 306 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 M0QZK8 103 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 GGCTO75223 188 aaKnown RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CST3P01034 146 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 GM2AP17900 193 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 RAB6AP20340 208 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 FOLR3P41439 243 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 EEF1A2Q05639 463 aaKnown RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TNK1Q13470 666 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 EXT1Q16394 746 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 MSS51Q4VC12 460 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ANKRD16Q6P6B7 361 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 KLHDC8AQ8IYD2 350 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 OR52E2Q8NGJ4 325 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 OR51A4Q8NGJ6 313 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 EDAQ92838 391 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 PHYHIPLQ96FC7 376 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 WDR76Q9H967 626 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 BABAM2Q9NXR7 383 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM189-UBE2V1I3L0A0 370 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 NPBWR1P48145 328 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 DIO3P55073 304 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 STK11Q15831 433 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SGCAQ16586 387 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms