RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Slc52a3Q9D6X5 460 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 HnrnpdlQ9Z130 301 aaKnown RBP10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Fer1l5P0DM40 2038 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Trbv21A0A0A6YX06 97 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gm28729A0A1B0GSW2 409 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr190K7N5T5 307 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Hsd3b3P26150 373 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gna13P27601 377 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Cd28P31041 218 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Lhx1P63006 406 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Kcnk6Q3TBV4 313 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Mtmr11Q3V1L6 700 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Serinc4Q5XK03 492 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 EdnraQ61614 427 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 BpiQ67E05 483 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Alkbh2Q6P6J4 239 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Fbxo42Q6PDJ6 717 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Hs6st2Q80UW0 612 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 AasdhQ80WC9 1100 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Zfp189Q8BKP2 608 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Noxa1Q8CJ00 444 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Vmn1r74Q8R290 304 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Dusp15Q8R4V2 235 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr98Q8VFD9 309 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Park7Q99LX0 189 aaKnown RBP10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Raf1Q99N57 648 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gid4Q9CPY6 217 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Pfn4Q9D6I3 129 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 CalyQ9DCA7 226 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Ca5bQ9QZA0 317 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Cacna1bO55017 2327 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Tmem240B2RWJ3 173 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Sp3O70494 783 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Mid1O70583 680 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Slc9a3r1P70441 355 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 CbfbQ08024 187 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 SctQ08535 133 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Qsox2Q3TMX7 692 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Bcl2a1bQ497M6 172 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gm5346Q7M766 736 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Cpne1Q8C166 536 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Ccdc187Q8C5V8 958 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Hist1h2aaQ8CGP4 129 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Cmtm4Q8CJ61 208 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Alkbh3Q8K1E6 286 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Klf11Q8K1S5 502 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Mrps23Q8VE22 177 aaKnown RBP10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 LgalslQ8VED9 172 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Elovl6Q920L5 267 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Sh3bgrlQ9JJU8 114 aaKnown RBP10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Nr4a3Q9QZB6 627 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Sema4fQ9Z123 777 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Spaca5A2AE20 160 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr1206A2ATJ9 307 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr601A2RS33 314 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr610E9Q598 315 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Plscr5J3QM92 274 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Vmn1r168K7N6B6 309 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gm8374L7N2A9 172 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 B3galt2O54905 422 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Cyp4a10O88833 509 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 NelfeP19426 375 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Nrg2P56974 756 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Btg1P62325 171 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Art5P70352 309 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Bpifa1P97361 278 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Serpina3mQ03734 418 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gpr39Q5U431 456 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Lrrn1Q61809 716 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr309Q7TS01 308 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr304Q7TS03 333 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Dsg1cQ7TSF0 911 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Q8BHG2 160 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Tmem255aQ8BHW5 351 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Emc1Q8C7X2 997 aaKnown RBP10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 GatcQ8CBY0 155 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr120Q8VFQ2 330 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr514Q8VFZ6 310 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Zfand2bQ91X58 257 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 HhatlQ9D1G3 503 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Mfsd2aQ9DA75 534 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Lman2Q9DBH5 358 aaKnown RBP10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Tssc4Q9JHE7 317 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Mocs2Q9Z223 189 aa10.71□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Pi4kaE9Q3L2 2105 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm14862B1AV28 81 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Aldh3b2E9Q3E1 479 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Vmn1r55E9Q8I6 310 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Zfp994J3QM38 661 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Papss2O88428 621 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Tyrp1P07147 537 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gja4P28235 333 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Rfx3P48381 749 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Hectd3Q3U487 861 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Creg2Q8BGC9 288 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Mettl21eQ8CDZ2 244 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 4921517D22RikQ8CET0 269 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Nupl2Q8CIC2 420 aaKnown RBP10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr881Q8VF63 314 aa10.71□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr868Q8VFI8 309 aa10.71□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms