RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Kcnc3Q63959 769 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Pced1aQ6P1Z5 449 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Ffar1Q76JU9 300 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Trappc6aQ78XR0 159 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Tas2r13Q7M720 305 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Zik1Q80YP6 463 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Ankrd46Q8BTZ5 228 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Pomgnt2Q8BW41 605 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Zhx3Q8C0Q2 951 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 EfhbQ8CDU5 853 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Osbpl11Q8CI95 751 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Rnf113a1Q8R3P8 341 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 AspnQ99MQ4 373 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Desi1Q9CQT7 168 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Slc25a27Q9D6D0 322 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 C1qtnf2Q9D8U4 294 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Tnfrsf21Q9EPU5 655 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Fgf21Q9JJN1 210 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Hsf4Q9R0L1 492 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Srebf1Q9WTN3 1134 aa10.54□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Olfr1247A2AT78 314 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Zfp605E9QAH2 694 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Gm8094K7N6U8 211 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 AlyrefO08583 255 aaKnown RBP10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 P01629 112 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Zfp26P10076 861 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Zfp28P10078 825 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Gabrg2P22723 474 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Csf2raQ00941 388 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 InhbbQ04999 411 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 D17Wsu92eQ3TT38 291 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Nkx6-3Q3UHX8 262 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Bcl2a1bQ497M6 172 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Mup20Q5FW60 181 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 4930438A08RikQ5SPH3 536 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Myl12aQ6ZWQ9 172 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Cst13Q80ZN5 141 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Bhlhe23Q8BGW3 223 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 NapepldQ8BH82 396 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Sirt7Q8BKJ9 402 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Glt28d2Q8BML3 165 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Ncs1Q8BNY6 190 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 SheQ8BSD5 492 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Lrp11Q8CB67 483 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Calhm5Q8R100 309 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 ScgnQ91WD9 276 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Zfp810Q99K45 461 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 HaghQ99KB8 309 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Lap3Q9CPY7 519 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Scamp2Q9ERN0 329 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Pde7bQ9QXQ1 446 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Rai1Q61818 1889 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Gm13102A2ASJ3 519 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Mettl8A2AUU0 281 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Rex2A2AWF2 685 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Slc22a28B2RT89 552 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Olfr172E9Q8F6 309 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Gm6882J3KMT3 313 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Stxbp1O08599 594 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Dll3O88516 592 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 FahP35505 419 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 RetP35546 1115 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Nsg2P47759 171 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 MazP56671 477 aaKnown RBP10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 UbqlnlQ14DL0 610 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Xrra1Q3U3V8 786 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Rnf224Q3UIW8 156 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Pgap1Q3UUQ7 922 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Olfr1275Q7TQY8 312 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Olfr1065Q7TR70 313 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Olfr699Q7TRN3 316 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Eif4e2Q8BMB3 245 aaKnown RBP10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 SdhaQ8K2B3 664 aaKnown RBP10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Scgb2b27Q8R1E9 112 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Vmn1r201Q8R262 300 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Blzf1Q8R2X8 403 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Olfr822Q8VFU1 312 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Rwdd3Q8VIL2 267 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Slc22a30Q96LX3 552 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Yif1bQ9CX30 311 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Gpn3Q9D3W4 284 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Cypt12Q9DAR6 119 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Pdzk1Q9JIL4 519 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Nkain4Q9JMG4 208 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Nubp1Q9R060 320 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Wdr90Q6ZPG2 1874 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Dchs2A0A0A6YW72 3346 aa10.53□□□□□ -0.72
Ddx55-201ENSMUST00000071057 Olfr396-ps1A0A0U1RNF5 211 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 Sac3d1A6H687 427 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 Coq10aE9Q3H6 259 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 DdostO54734 441 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 Csnk2a2O54833 350 aaKnown RBP10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 Bcl2a1dO55179 172 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 B2mP01887 119 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 ArafP04627 604 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 AcadmP45952 421 aaKnown RBP10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 Fosl2P47930 326 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 Jmjd8Q3TA59 316 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 Foxred1Q3TQB2 487 aa10.52□□□□□ -0.73
Ddx55-201ENSMUST00000071057 Tubal3Q3UX10 446 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 76.1 ms