RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Nrxn3Q6P9K9 1571 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Slc5a7Q8BGY9 580 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Ncr1Q8C567 325 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Thsd1Q9JM61 851 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Cdh20Q9Z0M3 801 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Pmm2Q9Z2M7 242 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr730E9Q8M3 318 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 En1P09065 401 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Thbs2Q03350 1172 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 FuzQ3UYI6 415 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr48Q8VGN4 301 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gm43191F6YIH5 235 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Arg2O08691 354 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 NoctO35710 429 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tppp2Q0P5Y3 170 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Taar8aQ5QD07 344 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr381Q5SSP0 311 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Eid2Q6X7S9 236 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gpr62Q80UC6 358 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Vgll2Q8BGW8 322 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Fbxw13Q8BI57 466 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Slc43a2Q8CGA3 568 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 HinfpQ8K1K9 503 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Amdhd1Q9DBA8 426 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Trex2Q9R1A9 236 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 ClcnkaQ9WUB7 687 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 4933403O08RikF6UK53 379 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr117L7N1Z1 317 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 PhyhO35386 338 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 UgdhO70475 493 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 NarflQ7TMW6 476 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 MmaaQ8C7H1 415 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Babam2Q8K3W0 383 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Hoxc12Q8K5B8 280 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Igsf8Q8R366 611 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr130Q8VFC1 317 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr1298Q8VGE6 312 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 4930578G10RikQ9D4Q4 153 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 AplfQ9D842 499 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Upp1P52624 311 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Dsc1P55849 886 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 MitfQ08874 526 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 NfkbidQ2TB02 327 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gpr174Q3U507 335 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Zdhhc18Q5Y5T2 380 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tnfrsf8Q60846 498 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Ptpmt1Q66GT5 193 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr1033Q8VFK5 310 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr1501Q8VFQ3 315 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tmem98Q91X86 226 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Ndufa6Q9CQZ5 131 aaKnown RBP13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Isoc2bQ9DCC7 210 aa13.14□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Foxred1Q3TQB2 487 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Shkbp1Q6P7W2 704 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Chst2Q80WV3 530 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tmprss7Q8BIK6 829 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Vmn1r42Q8VBS7 329 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Cd276Q8VE98 316 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 MrgprhQ99MT8 321 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Fam174aQ9D3L0 190 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gm10800D3Z496 220 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Znf683I7HJS4 458 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Bmp5P49003 452 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Rab7aP51150 207 aaKnown RBP13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 G6pdxQ00612 515 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Plpp5Q3UMZ3 260 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tmem253Q3UNB8 204 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Prss54Q7M756 383 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Sh3bgrl2Q8BG73 107 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Q8C3W1 322 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Cbx7Q8VDS3 158 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr509Q8VF20 321 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr870Q8VGG4 311 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tram2Q924Z5 370 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Alg2Q9DBE8 415 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr155Q9QZ22 319 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tbl2Q9R099 442 aaKnown RBP13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Irs2P81122 1321 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gm10720D3Z1I5 223 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Slurp2P0DP59 97 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 ApcsP12246 224 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Rab11aP62492 216 aaKnown RBP13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Fbxw16Q497Z0 464 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr594Q7TRR4 311 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Slc25a32Q8BMG8 316 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Vmn1r225Q8R2A5 298 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Bbox1Q924Y0 387 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Plpp3Q99JY8 312 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Sgk3Q9ERE3 496 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Cldn19Q9ET38 224 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Ptf1aQ9QX98 324 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Slc7a9Q9QXA6 487 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr159Q9QZ19 319 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Nrg2P56974 756 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Htr2bQ02152 479 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gpr55Q3UJF0 327 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Timm29Q8BGX2 266 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Acp6Q8BP40 418 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Vmn1r22Q8R2D1 302 aa13.13□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Rab40bQ8VHP8 278 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms