Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rab40bQ8VHP8 Gm25239-201ENSMUST00000174915 86 ntBASIC30.67■■■□□ 2.5
Rab40bQ8VHP8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Rab40bQ8VHP8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rab40bQ8VHP8 Psd-208ENSMUST00000224556 2034 ntBASIC29.38■■■□□ 2.29
Rab40bQ8VHP8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Rab40bQ8VHP8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rab40bQ8VHP8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rab40bQ8VHP8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rab40bQ8VHP8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rab40bQ8VHP8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rab40bQ8VHP8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Rab40bQ8VHP8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Rab40bQ8VHP8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Rab40bQ8VHP8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.78■■■□□ 2.04
Rab40bQ8VHP8 Gm15042-201ENSMUST00000120212 883 ntBASIC27.75■■■□□ 2.03
Rab40bQ8VHP8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rab40bQ8VHP8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Rab40bQ8VHP8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Rab40bQ8VHP8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rab40bQ8VHP8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rab40bQ8VHP8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rab40bQ8VHP8 Gm15045-201ENSMUST00000117359 883 ntBASIC27.28■■□□□ 1.96
Rab40bQ8VHP8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rab40bQ8VHP8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Rab40bQ8VHP8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rab40bQ8VHP8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rab40bQ8VHP8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rab40bQ8VHP8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.92■■□□□ 1.9
Rab40bQ8VHP8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rab40bQ8VHP8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.83■■□□□ 1.89
Rab40bQ8VHP8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rab40bQ8VHP8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.82■■□□□ 1.88
Rab40bQ8VHP8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rab40bQ8VHP8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rab40bQ8VHP8 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.57■■□□□ 1.84
Rab40bQ8VHP8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rab40bQ8VHP8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rab40bQ8VHP8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rab40bQ8VHP8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rab40bQ8VHP8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.39■■□□□ 1.82
Rab40bQ8VHP8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.33■■□□□ 1.81
Rab40bQ8VHP8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rab40bQ8VHP8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rab40bQ8VHP8 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.26■■□□□ 1.79
Rab40bQ8VHP8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rab40bQ8VHP8 Gm24109-201ENSMUST00000175489 103 ntBASIC26.16■■□□□ 1.78
Rab40bQ8VHP8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rab40bQ8VHP8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rab40bQ8VHP8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rab40bQ8VHP8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Rab40bQ8VHP8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rab40bQ8VHP8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Rab40bQ8VHP8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rab40bQ8VHP8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rab40bQ8VHP8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rab40bQ8VHP8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rab40bQ8VHP8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rab40bQ8VHP8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rab40bQ8VHP8 Gm23366-201ENSMUST00000175022 89 ntBASIC25.77■■□□□ 1.72
Rab40bQ8VHP8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.75■■□□□ 1.71
Rab40bQ8VHP8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rab40bQ8VHP8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rab40bQ8VHP8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Rab40bQ8VHP8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Rab40bQ8VHP8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rab40bQ8VHP8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rab40bQ8VHP8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rab40bQ8VHP8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rab40bQ8VHP8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rab40bQ8VHP8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.48■■□□□ 1.67
Rab40bQ8VHP8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rab40bQ8VHP8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Rab40bQ8VHP8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rab40bQ8VHP8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rab40bQ8VHP8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rab40bQ8VHP8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Rab40bQ8VHP8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rab40bQ8VHP8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Rab40bQ8VHP8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rab40bQ8VHP8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rab40bQ8VHP8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.16■■□□□ 1.62
Rab40bQ8VHP8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rab40bQ8VHP8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rab40bQ8VHP8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rab40bQ8VHP8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Rab40bQ8VHP8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rab40bQ8VHP8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rab40bQ8VHP8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rab40bQ8VHP8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.94■■□□□ 1.58
Rab40bQ8VHP8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Rab40bQ8VHP8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rab40bQ8VHP8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rab40bQ8VHP8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rab40bQ8VHP8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Rab40bQ8VHP8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Rab40bQ8VHP8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rab40bQ8VHP8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rab40bQ8VHP8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.78■■□□□ 1.56
Rab40bQ8VHP8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms