RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Chrna10B2RX82 447 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr655E9Q252 308 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Mid1O70583 680 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ntrk2P15209 821 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Cdh4P39038 913 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fgf17P63075 216 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Bpifa1P97361 278 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Khdc4Q3TCX3 612 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr843Q7TRG4 313 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fbxo34Q80XI1 695 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Sdhaf3Q8BQU3 125 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Pamr1Q8BU25 720 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Muc20Q8BUE7 656 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Mettl6Q8BVH9 282 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm10283Q8C3L5 117 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Shisa7Q8C3Q5 558 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ccm2lQ8VCC6 481 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 SgtbQ8VD33 304 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Vmn1r85Q8VIB8 308 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 EcdQ9CS74 641 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Sec13Q9D1M0 322 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Obp1aQ9D3H2 163 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Pard6gQ9JK84 382 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fbxw5Q9QXW2 573 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Zyg11aA2BFL2 627 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fbxw15L7N1X6 466 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ppp2cbP62715 309 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ppp2caP63330 309 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Serpine2Q07235 397 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Nudt18Q3U2V3 323 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Nhlrc4Q3UP44 136 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Lingo2Q3URE9 606 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 1700012B07RikQ3V0S8 276 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ssr4Q62186 172 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tas2r40Q7TQB8 319 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Avl9Q80U56 649 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Cldn34b3Q80ZS5 209 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Nup107Q8BH74 926 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Hist1h2aaQ8CGP4 129 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fbxl8Q8CIG9 374 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc25a42Q8R0Y8 318 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr97Q8VFE1 310 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gatad2bQ8VHR5 594 aaKnown RBP17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tnk1Q99ML2 666 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm7145A0A087WS64 360 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm28729A0A1B0GSW2 409 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr1314A2AVL6 312 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 P03987 398 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Diras2Q5PR73 199 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Crls1Q80ZM8 303 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc25a32Q8BMG8 316 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Spata33Q8C624 132 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tmem17Q8K0U3 198 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tmcc3Q8R310 477 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr98Q8VFD9 309 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr837Q8VFJ4 312 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr815Q8VFU0 316 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 AldobQ91Y97 364 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Decr2Q9WV68 292 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Minpp1Q9Z2L6 481 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 1700025B11RikA0A087WNZ6 93 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 9330182O14RikJ3QNB2 140 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 TtlP38585 377 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Eri2Q5BKS4 688 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Bcap29Q61334 240 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Snap91Q61548 901 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Nptx1Q62443 432 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 ToxQ66JW3 526 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 ManeaQ6NXH2 462 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 TifaQ793I8 184 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Q80Y39 304 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Flrt3Q8BGT1 649 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gpr107Q8BUV8 551 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Klhl12Q8BZM0 568 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 SinhcafQ8C8M1 221 aaKnown RBP17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Noxa1Q8CJ00 444 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Cd209dQ91ZW8 237 aa17.3■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm17949A0A1B0GRV7 212 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Zfp599E9PWP1 548 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm20518E9Q548 580 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr730E9Q8M3 318 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm3327F7C9A1 213 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Vmn1r14H3BJ46 303 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Dsg2O55111 1122 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 IapP24822 559 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Actc1P68033 377 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Acta1P68134 377 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Sox9Q04887 507 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 ptchd1Q14B62 888 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm648Q3UJ22 213 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Znf488Q5HZG9 337 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ubfd1Q78JW9 368 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr1167Q7TR26 316 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fmr1nbQ80ZA7 238 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 TigarQ8BZA9 269 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr883Q8VF64 309 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc7a13Q91WN3 478 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Rab3bQ9CZT8 219 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Hoga1Q9DCU9 321 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Cnot9Q9JKY0 299 aa17.29■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 58.6 ms