RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W YOL075CQ08234 1294 aa3.96□□□□□ -1.78
SWI1YPL016W SSC1P0CS90 654 aaKnown RBP3.96□□□□□ -1.78
SWI1YPL016W UBA1P22515 1024 aaKnown RBP3.96□□□□□ -1.78
SWI1YPL016W VPH2P32341 215 aa3.96□□□□□ -1.78
SWI1YPL016W COY1P34237 679 aa3.96□□□□□ -1.78
SWI1YPL016W ECM31P38122 312 aa3.96□□□□□ -1.78
SWI1YPL016W YHR112CP38716 378 aa3.96□□□□□ -1.78
SWI1YPL016W YHI9P38765 294 aa3.96□□□□□ -1.78
SWI1YPL016W NOC2P39744 710 aaKnown RBP3.96□□□□□ -1.78
SWI1YPL016W MKT1P40850 830 aaKnown RBP3.96□□□□□ -1.78
SWI1YPL016W FMP48P53233 369 aa3.96□□□□□ -1.78
SWI1YPL016W GPI17Q04080 534 aa3.96□□□□□ -1.78
SWI1YPL016W TRM11Q12463 433 aa3.96□□□□□ -1.78
SWI1YPL016W MATALPHA2P0CY08 210 aa3.96□□□□□ -1.78
SWI1YPL016W HMLALPHA2P0CY09 210 aa3.96□□□□□ -1.78
SWI1YPL016W RAD57P25301 460 aa3.96□□□□□ -1.78
SWI1YPL016W CTS1P29029 562 aa3.96□□□□□ -1.78
SWI1YPL016W RPN2P32565 945 aaKnown RBP3.96□□□□□ -1.78
SWI1YPL016W HBS1P32769 611 aaKnown RBP3.96□□□□□ -1.78
SWI1YPL016W DOM34P33309 386 aa3.96□□□□□ -1.78
SWI1YPL016W AIP1P46680 615 aaKnown RBP3.96□□□□□ -1.78
SWI1YPL016W RFX1P48743 811 aa3.96□□□□□ -1.78
SWI1YPL016W TOF1P53840 1238 aa3.96□□□□□ -1.78
SWI1YPL016W SLT2Q00772 484 aa3.96□□□□□ -1.78
SWI1YPL016W SYH1Q02875 849 aaKnown RBP3.96□□□□□ -1.78
SWI1YPL016W YML108WQ03759 105 aa3.96□□□□□ -1.78
SWI1YPL016W SMP3Q04174 516 aa3.96□□□□□ -1.78
SWI1YPL016W JIP5Q06214 492 aaPredicted RBP3.96□□□□□ -1.78
SWI1YPL016W RPL22AP05749 121 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W GPH1P06738 902 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W SRP101P32916 621 aa3.95□□□□□ -1.78
SWI1YPL016W GRE3P38715 327 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SWI1YPL016W FAR11P53917 953 aa3.95□□□□□ -1.78
SWI1YPL016W ALO1P54783 526 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W YDL124WQ07551 312 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W MNL2Q12205 849 aa3.95□□□□□ -1.78
SWI1YPL016W YAK1P14680 807 aa3.95□□□□□ -1.78
SWI1YPL016W SPO11P23179 398 aa3.95□□□□□ -1.78
SWI1YPL016W SPS22P25380 463 aa3.95□□□□□ -1.78
SWI1YPL016W EUG1P32474 517 aa3.95□□□□□ -1.78
SWI1YPL016W TFC3P34111 1160 aa3.95□□□□□ -1.78
SWI1YPL016W NUP120P35729 1037 aa3.95□□□□□ -1.78
SWI1YPL016W AFT2Q08957 416 aa3.95□□□□□ -1.78
SWI1YPL016W RPL24AP04449 155 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W NAT1P12945 854 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W POL30P15873 258 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W NIP1P32497 812 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W ARC19P33204 171 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W DBP7P36120 742 aaKnown RBP3.95□□□□□ -1.78
SWI1YPL016W GRX7P38068 203 aa3.95□□□□□ -1.78
SWI1YPL016W MRX3P38172 270 aa3.95□□□□□ -1.78
SWI1YPL016W NMD5P46970 1048 aa3.95□□□□□ -1.78
SWI1YPL016W VTC4P47075 721 aa3.95□□□□□ -1.78
SWI1YPL016W YPT11P48559 417 aa3.95□□□□□ -1.78
SWI1YPL016W OCA1P50946 238 aaPredicted RBP3.95□□□□□ -1.78
SWI1YPL016W DSL1P53847 754 aa3.95□□□□□ -1.78
SWI1YPL016W CAB1Q04430 367 aa3.95□□□□□ -1.78
SWI1YPL016W TY1A-DR4O74302 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-AP0CX57 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-PR1P0CX58 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-ORP0CX59 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-PR2P0CX60 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-DR5P0CX65 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-ER2P0CX66 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-GR3P0CX67 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-LR1P0CX68 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-MR2P0CX69 440 aa3.94□□□□□ -1.78
SWI1YPL016W MSD1P15179 658 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W THR4P16120 514 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W KIP2P28743 706 aa3.94□□□□□ -1.78
SWI1YPL016W GRX4P32642 244 aa3.94□□□□□ -1.78
SWI1YPL016W PEX2P32800 271 aa3.94□□□□□ -1.78
SWI1YPL016W MYO3P36006 1272 aa3.94□□□□□ -1.78
SWI1YPL016W SMX2P40204 77 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W TY1A-JR2P47099 440 aa3.94□□□□□ -1.78
SWI1YPL016W HOS2P53096 452 aaPredicted RBP3.94□□□□□ -1.78
SWI1YPL016W TY1A-DR1Q03856 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-ML1Q04706 440 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W TY1A-BRQ12217 440 aa3.94□□□□□ -1.78
SWI1YPL016W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
SWI1YPL016W OSH2Q12451 1283 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-NL2Q12470 440 aa3.94□□□□□ -1.78
SWI1YPL016W TY1A-GR2Q12485 440 aa3.94□□□□□ -1.78
SWI1YPL016W TUB1P09733 447 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W SPO12P17123 173 aa3.94□□□□□ -1.78
SWI1YPL016W CNA1P23287 553 aa3.94□□□□□ -1.78
SWI1YPL016W CLB2P24869 491 aa3.94□□□□□ -1.78
SWI1YPL016W GPI10P30777 616 aa3.94□□□□□ -1.78
SWI1YPL016W SEC21P32074 935 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W TYE7P33122 291 aaPredicted RBP3.94□□□□□ -1.78
SWI1YPL016W YBR032WP38223 100 aa3.94□□□□□ -1.78
SWI1YPL016W HSM3P38348 480 aa3.94□□□□□ -1.78
SWI1YPL016W PEX21P50091 288 aa3.94□□□□□ -1.78
SWI1YPL016W MDR1P53258 950 aa3.94□□□□□ -1.78
SWI1YPL016W MAL13P53338 473 aa3.94□□□□□ -1.78
SWI1YPL016W OPY2Q06810 360 aa3.94□□□□□ -1.78
SWI1YPL016W CDC53Q12018 815 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W YDL109CQ12103 647 aa3.94□□□□□ -1.78
SWI1YPL016W DBP10Q12389 995 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W RPS17AP02407 136 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 149.4 ms