RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	TAD1	P53065	400 aa		4.67	□□□□□ -1.66
CAF20	YOR276W	PBP1	P53297	722 aa	Known RBP	4.67	□□□□□ -1.66
CAF20	YOR276W	YNL034W	P53963	612 aa		4.67	□□□□□ -1.66
CAF20	YOR276W	YNL018C	P53976	612 aa		4.67	□□□□□ -1.66
CAF20	YOR276W	TGL2	P54857	326 aa		4.67	□□□□□ -1.66
CAF20	YOR276W	ACK1	Q07622	623 aa	Predicted RBP	4.67	□□□□□ -1.66
CAF20	YOR276W	GUP2	Q08929	609 aa		4.67	□□□□□ -1.66
CAF20	YOR276W	GIN4	Q12263	1142 aa		4.67	□□□□□ -1.66
CAF20	YOR276W	ACE2	P21192	770 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	DAL7	P21826	554 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	RFA1	P22336	621 aa	Known RBP	4.66	□□□□□ -1.66
CAF20	YOR276W	STE11	P23561	717 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	FUN30	P31380	1131 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	OAF1	P39720	1047 aa	Predicted RBP	4.66	□□□□□ -1.66
CAF20	YOR276W	DOT6	P40059	670 aa	Known RBP	4.66	□□□□□ -1.66
CAF20	YOR276W	ALY2	P47029	1046 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	YKE2	P52553	114 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
CAF20	YOR276W	NHX1	Q04121	633 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	COG8	Q04632	607 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	REH1	Q06709	432 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	GPB1	Q08886	897 aa		4.66	□□□□□ -1.66
CAF20	YOR276W	YTM1	Q12024	460 aa	Predicted RBP	4.66	□□□□□ -1.66
CAF20	YOR276W	KAR1	P11927	433 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	YCL002C	P25565	263 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	APL1	P27351	700 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	LST4	P34239	828 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	FUI1	P38196	639 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	RPN10	P38886	268 aa	Known RBP	4.65	□□□□□ -1.67
CAF20	YOR276W	PEA2	P40091	420 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	UBC9	P50623	157 aa	Predicted RBP	4.65	□□□□□ -1.67
CAF20	YOR276W	HFM1	P51979	1187 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	LRS4	Q04087	347 aa	Known RBP	4.65	□□□□□ -1.67
CAF20	YOR276W	ECM16	Q04217	1267 aa	Known RBP	4.65	□□□□□ -1.67
CAF20	YOR276W	YDR338C	Q05497	695 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	XYL2	Q07993	356 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
CAF20	YOR276W	PNS1	Q12412	539 aa		4.65	□□□□□ -1.67
CAF20	YOR276W	ATP4	P05626	244 aa		4.64	□□□□□ -1.67
CAF20	YOR276W	DAL3	P32459	195 aa		4.64	□□□□□ -1.67
CAF20	YOR276W	RRT14	P40470	206 aa		4.64	□□□□□ -1.67
CAF20	YOR276W	CEP3	P40969	608 aa		4.64	□□□□□ -1.67
CAF20	YOR276W	GZF3	P42944	551 aa	Known RBP	4.64	□□□□□ -1.67
CAF20	YOR276W	HXT16	P47185	567 aa		4.64	□□□□□ -1.67
CAF20	YOR276W	YGR153W	P48238	217 aa		4.64	□□□□□ -1.67
CAF20	YOR276W	MNN10	P50108	393 aa	Known RBP	4.64	□□□□□ -1.67
CAF20	YOR276W	VPS62	P53285	467 aa		4.64	□□□□□ -1.67
CAF20	YOR276W	OSW2	Q12202	724 aa		4.64	□□□□□ -1.67
CAF20	YOR276W	SST2	P11972	698 aa	Known RBP	4.63	□□□□□ -1.67
CAF20	YOR276W	AEP2	P22136	580 aa		4.63	□□□□□ -1.67
CAF20	YOR276W	MIH1	P23748	554 aa		4.63	□□□□□ -1.67
CAF20	YOR276W	URA1	P28272	314 aa	Predicted RBP	4.63	□□□□□ -1.67
CAF20	YOR276W	TRM2	P33753	639 aa		4.63	□□□□□ -1.67
CAF20	YOR276W	VPS24	P36095	224 aa	Known RBP	4.63	□□□□□ -1.67
CAF20	YOR276W	SAP190	P36123	1033 aa		4.63	□□□□□ -1.67
CAF20	YOR276W	RLP7	P40693	322 aa	Known RBP	4.63	□□□□□ -1.67
CAF20	YOR276W	SHR5	P41912	237 aa		4.63	□□□□□ -1.67
CAF20	YOR276W	DUG1	P43616	481 aa	Known RBP	4.63	□□□□□ -1.67
CAF20	YOR276W	NOG2	P53742	486 aa	Known RBP	4.63	□□□□□ -1.67
CAF20	YOR276W	VPS72	Q03388	795 aa		4.63	□□□□□ -1.67
CAF20	YOR276W	MSC2	Q03455	724 aa		4.63	□□□□□ -1.67
CAF20	YOR276W	PUS9	Q12069	462 aa		4.63	□□□□□ -1.67
CAF20	YOR276W	RPS9A	O13516	197 aa	Known RBP	4.62	□□□□□ -1.67
CAF20	YOR276W	NOT3	P06102	836 aa	Known RBP	4.62	□□□□□ -1.67
CAF20	YOR276W	TRX2	P22803	104 aa	Known RBP	4.62	□□□□□ -1.67
CAF20	YOR276W	HCM1	P25364	564 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	PWP2	P25635	923 aa	Known RBP	4.62	□□□□□ -1.67
CAF20	YOR276W	CCR4	P31384	837 aa	Known RBP	4.62	□□□□□ -1.67
CAF20	YOR276W	HSL7	P38274	827 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	TDA3	P38758	523 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	NIT2	P47016	307 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	GIS1	Q03833	894 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	YAP6	Q03935	383 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	CRR1	Q05790	422 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	TMA10	Q06177	86 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	HMI1	Q12039	706 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	RMP1	Q12530	201 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	YBR182C-A	Q8TGU6	64 aa		4.62	□□□□□ -1.67
CAF20	YOR276W	DIF1	O13577	133 aa		4.61	□□□□□ -1.67
CAF20	YOR276W	EMC1	P25574	760 aa		4.61	□□□□□ -1.67
CAF20	YOR276W	CYS3	P31373	394 aa	Known RBP	4.61	□□□□□ -1.67
CAF20	YOR276W	ECM21	P38167	1117 aa	Known RBP	4.61	□□□□□ -1.67
CAF20	YOR276W	YAP1801	P38856	637 aa		4.61	□□□□□ -1.67
CAF20	YOR276W	GPP2	P40106	250 aa	Known RBP	4.61	□□□□□ -1.67
CAF20	YOR276W	RET2	P43621	546 aa		4.61	□□□□□ -1.67
CAF20	YOR276W	MNN11	P46985	422 aa	Known RBP	4.61	□□□□□ -1.67
CAF20	YOR276W	MCM6	P53091	1017 aa	Known RBP	4.61	□□□□□ -1.67
CAF20	YOR276W	GTF1	P53260	183 aa	Predicted RBP	4.61	□□□□□ -1.67
CAF20	YOR276W	MET14	Q02196	202 aa		4.61	□□□□□ -1.67
CAF20	YOR276W	ECM9	Q02202	377 aa		4.61	□□□□□ -1.67
CAF20	YOR276W	NTO1	Q12311	748 aa		4.61	□□□□□ -1.67
CAF20	YOR276W	PRC1	P00729	532 aa		4.6	□□□□□ -1.67
CAF20	YOR276W	PIF1	P07271	859 aa		4.6	□□□□□ -1.67
CAF20	YOR276W	ENA1	P13587	1091 aa		4.6	□□□□□ -1.67
CAF20	YOR276W	RPC82	P32349	654 aa		4.6	□□□□□ -1.67
CAF20	YOR276W	RPD3	P32561	433 aa		4.6	□□□□□ -1.67
CAF20	YOR276W	YKR051W	P36142	418 aa		4.6	□□□□□ -1.67
CAF20	YOR276W	MSE1	P48525	536 aa		4.6	□□□□□ -1.67
CAF20	YOR276W	NPY1	P53164	384 aa		4.6	□□□□□ -1.67
CAF20	YOR276W	HDA1	P53973	706 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms