RNA–Protein interactions for RNA: YNL008C

ASI3, Transcript of Subunit of the nuclear inner membrane Asi ubiquitin ligase complex, yeast

Gene ASI3, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASI3	YNL008C	SHM2	P37291	469 aa	Known RBP	4.12	□□□□□ -1.75
ASI3	YNL008C	THI21	Q08975	551 aa		4.12	□□□□□ -1.75
ASI3	YNL008C	CAD1	P24813	409 aa	Known RBP	4.12	□□□□□ -1.75
ASI3	YNL008C	SEC21	P32074	935 aa	Known RBP	4.12	□□□□□ -1.75
ASI3	YNL008C	DCG1	P32460	244 aa		4.12	□□□□□ -1.75
ASI3	YNL008C	GIP4	P39732	760 aa		4.12	□□□□□ -1.75
ASI3	YNL008C	SSY5	P47002	699 aa		4.12	□□□□□ -1.75
ASI3	YNL008C	SWM1	Q12379	170 aa		4.12	□□□□□ -1.75
ASI3	YNL008C	NOP14	Q99207	810 aa	Known RBP	4.12	□□□□□ -1.75
ASI3	YNL008C	MSS4	P38994	779 aa		4.11	□□□□□ -1.75
ASI3	YNL008C	SNP1	Q00916	300 aa	Predicted RBP	4.11	□□□□□ -1.75
ASI3	YNL008C	CRR1	Q05790	422 aa		4.11	□□□□□ -1.75
ASI3	YNL008C	PEX19	Q07418	342 aa		4.11	□□□□□ -1.75
ASI3	YNL008C	YCR015C	P25616	317 aa		4.11	□□□□□ -1.75
ASI3	YNL008C	YKL222C	P35995	705 aa		4.11	□□□□□ -1.75
ASI3	YNL008C	RPN10	P38886	268 aa	Known RBP	4.11	□□□□□ -1.75
ASI3	YNL008C	SLU7	Q02775	382 aa	Known RBP	4.11	□□□□□ -1.75
ASI3	YNL008C	TFB2	Q02939	513 aa		4.11	□□□□□ -1.75
ASI3	YNL008C	UTP14	Q04500	899 aa	Known RBP	4.11	□□□□□ -1.75
ASI3	YNL008C	ENB1	Q08299	606 aa		4.11	□□□□□ -1.75
ASI3	YNL008C	TUB3	P09734	445 aa	Known RBP	4.1	□□□□□ -1.75
ASI3	YNL008C	RAD18	P10862	487 aa		4.1	□□□□□ -1.75
ASI3	YNL008C	PFK1	P16861	987 aa	Known RBP	4.1	□□□□□ -1.75
ASI3	YNL008C	HCM1	P25364	564 aa		4.1	□□□□□ -1.75
ASI3	YNL008C	SFP1	P32432	683 aa		4.1	□□□□□ -1.75
ASI3	YNL008C	SAK1	P38990	1142 aa		4.1	□□□□□ -1.75
ASI3	YNL008C	PZF1	P39933	429 aa		4.1	□□□□□ -1.75
ASI3	YNL008C	VHR1	P40522	640 aa		4.1	□□□□□ -1.75
ASI3	YNL008C	PHO23	P50947	330 aa		4.1	□□□□□ -1.75
ASI3	YNL008C	ZIP2	P53061	704 aa		4.1	□□□□□ -1.75
ASI3	YNL008C	YDR338C	Q05497	695 aa		4.1	□□□□□ -1.75
ASI3	YNL008C	PMA1	P05030	918 aa	Known RBP	4.09	□□□□□ -1.75
ASI3	YNL008C	FPR3	P38911	411 aa	Known RBP	4.09	□□□□□ -1.75
ASI3	YNL008C	LAS17	Q12446	633 aa		4.09	□□□□□ -1.75
ASI3	YNL008C	RPL8A	P17076	256 aa	Known RBP	4.09	□□□□□ -1.76
ASI3	YNL008C	HOG1	P32485	435 aa		4.09	□□□□□ -1.76
ASI3	YNL008C	YNL193W	P53870	558 aa		4.09	□□□□□ -1.76
ASI3	YNL008C	ASI2	P53895	289 aa		4.09	□□□□□ -1.76
ASI3	YNL008C	PKH1	Q03407	766 aa		4.09	□□□□□ -1.76
ASI3	YNL008C	NHX1	Q04121	633 aa		4.09	□□□□□ -1.76
ASI3	YNL008C	MUS81	Q04149	632 aa	Predicted RBP	4.09	□□□□□ -1.76
ASI3	YNL008C	PCL2	P25693	308 aa		4.08	□□□□□ -1.76
ASI3	YNL008C	YEL1	P34225	687 aa		4.08	□□□□□ -1.76
ASI3	YNL008C	BRN1	P38170	754 aa		4.08	□□□□□ -1.76
ASI3	YNL008C	DNM1	P54861	757 aa		4.08	□□□□□ -1.76
ASI3	YNL008C	NTO1	Q12311	748 aa		4.08	□□□□□ -1.76
ASI3	YNL008C	TRM11	Q12463	433 aa		4.08	□□□□□ -1.76
ASI3	YNL008C	PRP4	P20053	465 aa	Known RBP	4.07	□□□□□ -1.76
ASI3	YNL008C	NGG1	P32494	702 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	CTF13	P35203	478 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	SPC42	P36094	363 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	RPP1	P38786	293 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	YFL052W	P43551	465 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	MTR3	P48240	250 aa	Predicted RBP	4.07	□□□□□ -1.76
ASI3	YNL008C	NPY1	P53164	384 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	DOS2	P54858	310 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	YLR001C	Q07895	862 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	HSL7	P38274	827 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	PFA3	P42836	336 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	ADR1	P07248	1323 aa		4.07	□□□□□ -1.76
ASI3	YNL008C	SFL1	P20134	766 aa		4.06	□□□□□ -1.76
ASI3	YNL008C	TRM2	P33753	639 aa		4.06	□□□□□ -1.76
ASI3	YNL008C	BNA2	P47125	453 aa		4.06	□□□□□ -1.76
ASI3	YNL008C	YJR142W	P47173	342 aa		4.06	□□□□□ -1.76
ASI3	YNL008C	IOC4	Q04213	475 aa		4.06	□□□□□ -1.76
ASI3	YNL008C	COG8	Q04632	607 aa		4.06	□□□□□ -1.76
ASI3	YNL008C	YGR161W-C	Q3E744	92 aa		4.06	□□□□□ -1.76
ASI3	YNL008C	TRP4	P07285	380 aa	Predicted RBP	4.05	□□□□□ -1.76
ASI3	YNL008C	MIH1	P23748	554 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	DOT6	P40059	670 aa	Known RBP	4.05	□□□□□ -1.76
ASI3	YNL008C	AIM14	P53109	570 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	ASM4	Q05166	528 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	AIM39	Q08223	395 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	GPR1	Q12361	961 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	YLR149C	Q99296	730 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	Q0142	Q9ZZW4	58 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	PMI40	P29952	429 aa	Known RBP	4.05	□□□□□ -1.76
ASI3	YNL008C	DEF1	P35732	738 aa	Known RBP	4.05	□□□□□ -1.76
ASI3	YNL008C	YKR051W	P36142	418 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	PCM1	P38628	557 aa	Known RBP	4.05	□□□□□ -1.76
ASI3	YNL008C	BUL1	P48524	976 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	SDA1	P53313	767 aa	Known RBP	4.05	□□□□□ -1.76
ASI3	YNL008C	ERG5	P54781	538 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	ATG33	Q06485	197 aa		4.05	□□□□□ -1.76
ASI3	YNL008C	YLR415C	O13578	112 aa		4.04	□□□□□ -1.76
ASI3	YNL008C	HRR25	P29295	494 aa	Known RBP	4.04	□□□□□ -1.76
ASI3	YNL008C	HLJ1	P48353	224 aa		4.04	□□□□□ -1.76
ASI3	YNL008C	UBC9	P50623	157 aa	Predicted RBP	4.04	□□□□□ -1.76
ASI3	YNL008C	MET13	P53128	600 aa		4.04	□□□□□ -1.76
ASI3	YNL008C	MRPS35	P53292	345 aa		4.04	□□□□□ -1.76
ASI3	YNL008C	RPN7	Q06103	429 aa	Known RBP	4.04	□□□□□ -1.76
ASI3	YNL008C	GIN4	Q12263	1142 aa		4.04	□□□□□ -1.76
ASI3	YNL008C	TUB2	P02557	457 aa	Known RBP	4.04	□□□□□ -1.76
ASI3	YNL008C	HMG1	P12683	1054 aa		4.04	□□□□□ -1.76
ASI3	YNL008C	EFT1	P32324	842 aa	Known RBP	4.04	□□□□□ -1.76
ASI3	YNL008C	URN1	Q06525	465 aa	Known RBP	4.04	□□□□□ -1.76
ASI3	YNL008C	MGS1	P40151	587 aa		4.03	□□□□□ -1.76
ASI3	YNL008C	FKH2	P41813	862 aa		4.03	□□□□□ -1.76
ASI3	YNL008C	YBP2	P53169	641 aa		4.03	□□□□□ -1.76
ASI3	YNL008C	YKR018C	P36114	725 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms