RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C NAS6P50086 228 aa2.52□□□□□ -2.01
VPS13YLL040C PIP2P52960 996 aa2.52□□□□□ -2.01
VPS13YLL040C YGR125WP53273 1036 aa2.52□□□□□ -2.01
VPS13YLL040C YNL011CP53980 444 aa2.52□□□□□ -2.01
VPS13YLL040C RSA3Q05942 220 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C ARG82P07250 355 aa2.52□□□□□ -2.01
VPS13YLL040C SUP45P12385 437 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C EXO70P19658 623 aa2.52□□□□□ -2.01
VPS13YLL040C BUD2P33314 1104 aa2.52□□□□□ -2.01
VPS13YLL040C COY1P34237 679 aa2.52□□□□□ -2.01
VPS13YLL040C YRB2P40517 327 aa2.52□□□□□ -2.01
VPS13YLL040C MPH1P40562 993 aa2.52□□□□□ -2.01
VPS13YLL040C MKT1P40850 830 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C HOP2P53187 214 aa2.52□□□□□ -2.01
VPS13YLL040C YAF9P53930 226 aa2.52□□□□□ -2.01
VPS13YLL040C OM45P16547 393 aa2.52□□□□□ -2.01
VPS13YLL040C FAR1P21268 830 aa2.52□□□□□ -2.01
VPS13YLL040C YBL055CP34220 418 aaPredicted RBP2.52□□□□□ -2.01
VPS13YLL040C FRE2P36033 711 aa2.52□□□□□ -2.01
VPS13YLL040C GAA1P39012 614 aa2.52□□□□□ -2.01
VPS13YLL040C CBK1P53894 756 aa2.52□□□□□ -2.01
VPS13YLL040C PPM1Q04081 328 aa2.52□□□□□ -2.01
VPS13YLL040C SOV1Q04748 898 aa2.52□□□□□ -2.01
VPS13YLL040C GRX8Q05926 109 aa2.52□□□□□ -2.01
VPS13YLL040C CBF5P33322 483 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
VPS13YLL040C SWH1P35845 1188 aa2.52□□□□□ -2.01
VPS13YLL040C TIF5P38431 405 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C RNH1Q04740 348 aa2.52□□□□□ -2.01
VPS13YLL040C SSQ1Q05931 657 aaPredicted RBP2.52□□□□□ -2.01
VPS13YLL040C FAS2P19097 1887 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C PGK1P00560 416 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C PUT4P15380 627 aa2.52□□□□□ -2.01
VPS13YLL040C PTC3P34221 468 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C DIM1P41819 318 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C LSB1P53281 241 aa2.52□□□□□ -2.01
VPS13YLL040C SRD1P09007 221 aa2.51□□□□□ -2.01
VPS13YLL040C FMP23P38231 175 aa2.51□□□□□ -2.01
VPS13YLL040C SMX2P40204 77 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C YJL132WP47014 750 aa2.51□□□□□ -2.01
VPS13YLL040C RIX7Q07844 837 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C CUE5Q08412 411 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C IOC2Q12072 812 aa2.51□□□□□ -2.01
VPS13YLL040C HRT3Q12347 344 aa2.51□□□□□ -2.01
VPS13YLL040C SNT1P25357 1226 aa2.51□□□□□ -2.01
VPS13YLL040C CDC15P27636 974 aa2.51□□□□□ -2.01
VPS13YLL040C ADA2Q02336 434 aa2.51□□□□□ -2.01
VPS13YLL040C CSM3Q04659 317 aa2.51□□□□□ -2.01
VPS13YLL040C SLX4Q12098 748 aa2.51□□□□□ -2.01
VPS13YLL040C YDL206WQ12424 762 aa2.51□□□□□ -2.01
VPS13YLL040C SPT16P32558 1035 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C MNR2P35724 969 aa2.51□□□□□ -2.01
VPS13YLL040C YKR018CP36114 725 aa2.51□□□□□ -2.01
VPS13YLL040C MGA2P40578 1113 aa2.51□□□□□ -2.01
VPS13YLL040C AGP3P43548 558 aa2.51□□□□□ -2.01
VPS13YLL040C RRI2Q12348 645 aa2.51□□□□□ -2.01
VPS13YLL040C RRP36Q12481 300 aaPredicted RBP2.51□□□□□ -2.01
VPS13YLL040C YPR089WO13585 888 aa2.51□□□□□ -2.01
VPS13YLL040C IME1P21190 360 aa2.51□□□□□ -2.01
VPS13YLL040C APE2P32454 952 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C YBR287WP38355 427 aa2.51□□□□□ -2.01
VPS13YLL040C MTG2P38860 518 aa2.51□□□□□ -2.01
VPS13YLL040C GCD14P46959 383 aaPredicted RBP2.51□□□□□ -2.01
VPS13YLL040C VPS64Q03944 604 aa2.51□□□□□ -2.01
VPS13YLL040C GAL83Q04739 417 aa2.51□□□□□ -2.01
VPS13YLL040C THI7Q05998 598 aa2.51□□□□□ -2.01
VPS13YLL040C NOC3Q07896 663 aaPredicted RBP2.51□□□□□ -2.01
VPS13YLL040C MET6P05694 767 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C VPS1P21576 704 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C CLB4P24871 460 aa2.51□□□□□ -2.01
VPS13YLL040C BUD14P27637 709 aa2.51□□□□□ -2.01
VPS13YLL040C PSE1P32337 1089 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C MVD1P32377 396 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C COT1P32798 439 aa2.51□□□□□ -2.01
VPS13YLL040C MCD4P36051 919 aa2.51□□□□□ -2.01
VPS13YLL040C YFL034WP43564 1073 aa2.51□□□□□ -2.01
VPS13YLL040C IML2P47031 731 aa2.51□□□□□ -2.01
VPS13YLL040C YGR111WP53265 400 aa2.51□□□□□ -2.01
VPS13YLL040C YGR273CP53329 174 aa2.51□□□□□ -2.01
VPS13YLL040C CRF1Q04930 467 aa2.51□□□□□ -2.01
VPS13YLL040C PIG1Q06216 648 aa2.51□□□□□ -2.01
VPS13YLL040C ISA1Q07821 250 aaPredicted RBP2.51□□□□□ -2.01
VPS13YLL040C RRP6Q12149 733 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C KSS1P14681 368 aa2.51□□□□□ -2.01
VPS13YLL040C SRV2P17555 526 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C PRP9P19736 530 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C MRF1P30775 413 aaPredicted RBP2.51□□□□□ -2.01
VPS13YLL040C ECM32P32644 1121 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C BIT61P47041 543 aa2.51□□□□□ -2.01
VPS13YLL040C ISM1P48526 1002 aa2.51□□□□□ -2.01
VPS13YLL040C AZR1P50080 613 aa2.51□□□□□ -2.01
VPS13YLL040C RTA1P53047 317 aa2.51□□□□□ -2.01
VPS13YLL040C ADI1Q03677 179 aa2.51□□□□□ -2.01
VPS13YLL040C HFD1Q04458 532 aa2.51□□□□□ -2.01
VPS13YLL040C GNT1Q12096 491 aa2.51□□□□□ -2.01
VPS13YLL040C PAB1P04147 577 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
VPS13YLL040C CDC37P06101 506 aaKnown RBP2.51□□□□□ -2.01
VPS13YLL040C AMD2P22580 549 aa2.51□□□□□ -2.01
VPS13YLL040C KAR4P25583 335 aa2.51□□□□□ -2.01
VPS13YLL040C SMI1P32566 505 aa2.51□□□□□ -2.01
VPS13YLL040C HES1P35843 434 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms