RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C PLB1P39105 664 aa1.41□□□□□ -2.18
UBP3YER151C QRI1P43123 477 aaKnown RBP1.41□□□□□ -2.18
UBP3YER151C MET12P46151 657 aa1.41□□□□□ -2.18
UBP3YER151C RSM26P47141 266 aa1.41□□□□□ -2.18
UBP3YER151C ENT3P47160 408 aa1.41□□□□□ -2.18
UBP3YER151C FAA4P47912 694 aaKnown RBP1.41□□□□□ -2.18
UBP3YER151C EEB1Q02891 456 aa1.41□□□□□ -2.18
UBP3YER151C UTP14Q04500 899 aaKnown RBP1.41□□□□□ -2.18
UBP3YER151C AIM39Q08223 395 aa1.41□□□□□ -2.18
UBP3YER151C LAS17Q12446 633 aa1.41□□□□□ -2.18
UBP3YER151C DED1P06634 604 aaKnown RBP1.4□□□□□ -2.18
UBP3YER151C ACE2P21192 770 aa1.4□□□□□ -2.18
UBP3YER151C DBP2P24783 546 aaKnown RBP1.4□□□□□ -2.18
UBP3YER151C CUE2P36075 443 aaKnown RBP1.4□□□□□ -2.18
UBP3YER151C YBR062CP38239 180 aa1.4□□□□□ -2.18
UBP3YER151C RIM4P38741 713 aa1.4□□□□□ -2.18
UBP3YER151C NUG1P40010 520 aaKnown RBP1.4□□□□□ -2.18
UBP3YER151C SEC5P89102 971 aa1.4□□□□□ -2.18
UBP3YER151C PKH1Q03407 766 aa1.4□□□□□ -2.18
UBP3YER151C ENT2Q05785 613 aa1.4□□□□□ -2.18
UBP3YER151C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.4□□□□□ -2.18not detected
UBP3YER151C YER152CP10356 443 aa1.4□□□□□ -2.19
UBP3YER151C MKK2P32491 506 aa1.4□□□□□ -2.19
UBP3YER151C GCD6P32501 712 aaKnown RBP1.4□□□□□ -2.19
UBP3YER151C RER2P35196 286 aa1.4□□□□□ -2.19
UBP3YER151C NMD2P38798 1089 aaKnown RBP1.4□□□□□ -2.19
UBP3YER151C GCV2P49095 1034 aa1.4□□□□□ -2.19
UBP3YER151C NPL3Q01560 414 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
UBP3YER151C VID22Q05934 901 aa1.4□□□□□ -2.19
UBP3YER151C BUD21Q08492 214 aaPredicted RBP1.4□□□□□ -2.19
UBP3YER151C AFT2Q08957 416 aa1.4□□□□□ -2.19
UBP3YER151C SVS1Q12254 260 aa1.4□□□□□ -2.19
UBP3YER151C HIS5P07172 385 aa1.39□□□□□ -2.19
UBP3YER151C KIN2P13186 1147 aaKnown RBP1.39□□□□□ -2.19
UBP3YER151C SWE1P32944 819 aa1.39□□□□□ -2.19
UBP3YER151C SQT1P35184 431 aa1.39□□□□□ -2.19
UBP3YER151C NPR2P39923 615 aa1.39□□□□□ -2.19
UBP3YER151C MND2P40577 368 aa1.39□□□□□ -2.19
UBP3YER151C MTC3P53077 123 aa1.39□□□□□ -2.19
UBP3YER151C GYL1Q04322 720 aa1.39□□□□□ -2.19
UBP3YER151C MMR1Q06324 491 aa1.39□□□□□ -2.19
UBP3YER151C YAP7Q08182 245 aa1.39□□□□□ -2.19
UBP3YER151C DAP1Q12091 152 aa1.39□□□□□ -2.19
UBP3YER151C HEM3P28789 327 aa1.39□□□□□ -2.19
UBP3YER151C YKL069WP36088 180 aa1.39□□□□□ -2.19
UBP3YER151C RGD1P38339 666 aa1.39□□□□□ -2.19
UBP3YER151C KSP1P38691 1029 aaKnown RBP1.39□□□□□ -2.19
UBP3YER151C SNF7P39929 240 aaKnown RBP1.39□□□□□ -2.19
UBP3YER151C SIW14P53965 281 aa1.39□□□□□ -2.19
UBP3YER151C TPO1Q07824 586 aa1.39□□□□□ -2.19
UBP3YER151C YOL024WQ08172 172 aa1.39□□□□□ -2.19
UBP3YER151C CLF1Q12309 687 aaPredicted RBP1.39□□□□□ -2.19
UBP3YER151C TYS1P36421 394 aaKnown RBP1.38□□□□□ -2.19
UBP3YER151C PEA2P40091 420 aa1.38□□□□□ -2.19
UBP3YER151C YIL089WP40500 205 aa1.38□□□□□ -2.19
UBP3YER151C MPH1P40562 993 aa1.38□□□□□ -2.19
UBP3YER151C NOP2P40991 618 aaKnown RBP1.38□□□□□ -2.19
UBP3YER151C LIF1P53150 421 aa1.38□□□□□ -2.19
UBP3YER151C MAP1Q01662 387 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
UBP3YER151C RBA50Q04418 439 aa1.38□□□□□ -2.19
UBP3YER151C ENB1Q08299 606 aa1.38□□□□□ -2.19
UBP3YER151C KCS1Q12494 1050 aa1.38□□□□□ -2.19
UBP3YER151C FKS1P38631 1876 aaKnown RBP1.38□□□□□ -2.19
UBP3YER151C PHR1P05066 565 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
UBP3YER151C APL1P27351 700 aa1.38□□□□□ -2.19
UBP3YER151C HRR25P29295 494 aaKnown RBP1.38□□□□□ -2.19
UBP3YER151C APE3P37302 537 aaKnown RBP1.38□□□□□ -2.19
UBP3YER151C GTF1P53260 183 aaPredicted RBP1.38□□□□□ -2.19
UBP3YER151C TMN2Q04562 672 aa1.38□□□□□ -2.19
UBP3YER151C MRL1Q06815 381 aa1.38□□□□□ -2.19
UBP3YER151C OXR1Q08952 273 aa1.38□□□□□ -2.19
UBP3YER151C SNA3P14359 133 aa1.38□□□□□ -2.19
UBP3YER151C MLS1P30952 554 aa1.38□□□□□ -2.19
UBP3YER151C PEP7P32609 515 aa1.38□□□□□ -2.19
UBP3YER151C YKL151CP36059 337 aa1.38□□□□□ -2.19
UBP3YER151C GGA2P38817 585 aaKnown RBP1.38□□□□□ -2.19
UBP3YER151C CHZ1P40019 153 aaPredicted RBP1.38□□□□□ -2.19
UBP3YER151C URM1P40554 99 aaPredicted RBP1.38□□□□□ -2.19
UBP3YER151C MRPS18P42847 217 aa1.38□□□□□ -2.19
UBP3YER151C RSC8P43609 557 aaKnown RBP1.38□□□□□ -2.19
UBP3YER151C YGR012WP53206 393 aa1.38□□□□□ -2.19
UBP3YER151C TIF35Q04067 274 aaKnown RBP1.38□□□□□ -2.19
UBP3YER151C PFK1P16861 987 aaKnown RBP1.37□□□□□ -2.19
UBP3YER151C SLA2P33338 968 aa1.37□□□□□ -2.19
UBP3YER151C NPP2P39997 493 aa1.37□□□□□ -2.19
UBP3YER151C CSM2P40465 213 aa1.37□□□□□ -2.19
UBP3YER151C NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
UBP3YER151C YLR040CQ07988 224 aa1.37□□□□□ -2.19
UBP3YER151C MCD1Q12158 566 aa1.37□□□□□ -2.19
UBP3YER151C FLO11P08640 1367 aa1.37□□□□□ -2.19
UBP3YER151C TRP2P00899 507 aaKnown RBP1.37□□□□□ -2.19
UBP3YER151C BI4P03879 638 aa1.37□□□□□ -2.19
UBP3YER151C CDC34P14682 295 aa1.37□□□□□ -2.19
UBP3YER151C SEC14P24280 304 aaKnown RBP1.37□□□□□ -2.19
UBP3YER151C CNN1P43618 361 aa1.37□□□□□ -2.19
UBP3YER151C HFM1P51979 1187 aa1.37□□□□□ -2.19
UBP3YER151C YGR053CP53234 283 aa1.37□□□□□ -2.19
UBP3YER151C SSL1Q04673 461 aaPredicted RBP1.37□□□□□ -2.19
UBP3YER151C RRN11Q04712 507 aa1.37□□□□□ -2.19
UBP3YER151C YLR225CQ05948 407 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms