RNA–Protein interactions for RNA: YDR398W

UTP5, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP5, Length 1,932 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP5	YDR398W	UGO1	Q03327	502 aa		4.93	□□□□□ -1.62
UTP5	YDR398W	PEX19	Q07418	342 aa		4.93	□□□□□ -1.62
UTP5	YDR398W	SWM1	Q12379	170 aa		4.93	□□□□□ -1.62
UTP5	YDR398W	ZDS1	P50111	915 aa	Known RBP	4.93	□□□□□ -1.62
UTP5	YDR398W	ALG12	P53730	551 aa		4.93	□□□□□ -1.62
UTP5	YDR398W	DIF1	O13577	133 aa		4.92	□□□□□ -1.62
UTP5	YDR398W	PPG1	P32838	368 aa		4.92	□□□□□ -1.62
UTP5	YDR398W	DEF1	P35732	738 aa	Known RBP	4.92	□□□□□ -1.62
UTP5	YDR398W	MSS4	P38994	779 aa		4.92	□□□□□ -1.62
UTP5	YDR398W	DSS1	P39112	969 aa		4.92	□□□□□ -1.62
UTP5	YDR398W	SHR5	P41912	237 aa		4.92	□□□□□ -1.62
UTP5	YDR398W	ALY2	P47029	1046 aa		4.92	□□□□□ -1.62
UTP5	YDR398W	TUB2	P02557	457 aa	Known RBP	4.91	□□□□□ -1.62
UTP5	YDR398W	CDC9	P04819	755 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	PEX6	P33760	1030 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	STO1	P34160	861 aa	Known RBP	4.91	□□□□□ -1.62
UTP5	YDR398W	MCD4	P36051	919 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	SSY5	P47002	699 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	BUL1	P48524	976 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	ASI2	P53895	289 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	URN1	Q06525	465 aa	Known RBP	4.91	□□□□□ -1.62
UTP5	YDR398W	VBA3	P25594	458 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	VHR1	P40522	640 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	GSF2	Q04697	403 aa	Known RBP	4.91	□□□□□ -1.62
UTP5	YDR398W	NTG2	Q08214	380 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	TRM11	Q12463	433 aa		4.91	□□□□□ -1.62
UTP5	YDR398W	PRP4	P20053	465 aa	Known RBP	4.9	□□□□□ -1.62
UTP5	YDR398W	CTF13	P35203	478 aa		4.9	□□□□□ -1.62
UTP5	YDR398W	NMD2	P38798	1089 aa	Known RBP	4.9	□□□□□ -1.62
UTP5	YDR398W	PZF1	P39933	429 aa		4.9	□□□□□ -1.62
UTP5	YDR398W	CAF16	P43569	289 aa		4.9	□□□□□ -1.62
UTP5	YDR398W	ZIP2	P53061	704 aa		4.9	□□□□□ -1.62
UTP5	YDR398W	ERG5	P54781	538 aa		4.9	□□□□□ -1.62
UTP5	YDR398W	TRP4	P07285	380 aa	Predicted RBP	4.89	□□□□□ -1.63
UTP5	YDR398W	HRR25	P29295	494 aa	Known RBP	4.89	□□□□□ -1.63
UTP5	YDR398W	SAK1	P38990	1142 aa		4.89	□□□□□ -1.63
UTP5	YDR398W	MUS81	Q04149	632 aa	Predicted RBP	4.89	□□□□□ -1.63
UTP5	YDR398W	YDR338C	Q05497	695 aa		4.89	□□□□□ -1.63
UTP5	YDR398W	AIM39	Q08223	395 aa		4.89	□□□□□ -1.63
UTP5	YDR398W	SRD1	P09007	221 aa		4.89	□□□□□ -1.63
UTP5	YDR398W	SNP1	Q00916	300 aa	Predicted RBP	4.89	□□□□□ -1.63
UTP5	YDR398W	EFT1	P32324	842 aa	Known RBP	4.88	□□□□□ -1.63
UTP5	YDR398W	AIM21	P40563	679 aa		4.88	□□□□□ -1.63
UTP5	YDR398W	PFA3	P42836	336 aa		4.88	□□□□□ -1.63
UTP5	YDR398W	MSE1	P48525	536 aa		4.88	□□□□□ -1.63
UTP5	YDR398W	PKH1	Q03407	766 aa		4.88	□□□□□ -1.63
UTP5	YDR398W	CRR1	Q05790	422 aa		4.88	□□□□□ -1.63
UTP5	YDR398W	PUS9	Q12069	462 aa		4.88	□□□□□ -1.63
UTP5	YDR398W	RPP1	P38786	293 aa		4.87	□□□□□ -1.63
UTP5	YDR398W	SUN4	P53616	420 aa		4.87	□□□□□ -1.63
UTP5	YDR398W	KIN4	Q01919	800 aa		4.87	□□□□□ -1.63
UTP5	YDR398W	GPR1	Q12361	961 aa		4.87	□□□□□ -1.63
UTP5	YDR398W	NGG1	P32494	702 aa		4.87	□□□□□ -1.63
UTP5	YDR398W	RPN10	P38886	268 aa	Known RBP	4.87	□□□□□ -1.63
UTP5	YDR398W	MRPS35	P53292	345 aa		4.86	□□□□□ -1.63
UTP5	YDR398W	YLR415C	O13578	112 aa		4.85	□□□□□ -1.63
UTP5	YDR398W	HOG1	P32485	435 aa		4.85	□□□□□ -1.63
UTP5	YDR398W	KTR4	P38131	464 aa		4.85	□□□□□ -1.63
UTP5	YDR398W	MTR3	P48240	250 aa	Predicted RBP	4.85	□□□□□ -1.63
UTP5	YDR398W	RAD18	P10862	487 aa		4.85	□□□□□ -1.63
UTP5	YDR398W	ERG4	P25340	473 aa		4.85	□□□□□ -1.63
UTP5	YDR398W	SIC1	P38634	284 aa		4.85	□□□□□ -1.63
UTP5	YDR398W	BNA2	P47125	453 aa		4.85	□□□□□ -1.63
UTP5	YDR398W	ASM4	Q05166	528 aa		4.85	□□□□□ -1.63
UTP5	YDR398W	YLR040C	Q07988	224 aa		4.85	□□□□□ -1.63
UTP5	YDR398W	MIH1	P23748	554 aa		4.84	□□□□□ -1.63
UTP5	YDR398W	YEL1	P34225	687 aa		4.84	□□□□□ -1.63
UTP5	YDR398W	NHX1	Q04121	633 aa		4.84	□□□□□ -1.63
UTP5	YDR398W	YLR149C	Q99296	730 aa		4.84	□□□□□ -1.63
UTP5	YDR398W	PCL2	P25693	308 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	CHS7	P38843	316 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	MNN1	P39106	762 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	FKH2	P41813	862 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	YFL052W	P43551	465 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	NPY1	P53164	384 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	TFB2	Q02939	513 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	NRG1	Q03125	231 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	COG8	Q04632	607 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	TRM13	Q12383	476 aa		4.84	□□□□□ -1.64
UTP5	YDR398W	NOP14	Q99207	810 aa	Known RBP	4.84	□□□□□ -1.64
UTP5	YDR398W	MET3	P08536	511 aa		4.83	□□□□□ -1.64
UTP5	YDR398W	HSL7	P38274	827 aa		4.83	□□□□□ -1.64
UTP5	YDR398W	DLT1	Q04216	342 aa		4.83	□□□□□ -1.64
UTP5	YDR398W	YLR001C	Q07895	862 aa		4.83	□□□□□ -1.64
UTP5	YDR398W	PNS1	Q12412	539 aa		4.83	□□□□□ -1.64
UTP5	YDR398W	ELO3	P40319	345 aa		4.82	□□□□□ -1.64
UTP5	YDR398W	RNT1	Q02555	471 aa		4.82	□□□□□ -1.64
UTP5	YDR398W	Q0142	Q9ZZW4	58 aa		4.82	□□□□□ -1.64
UTP5	YDR398W	YKR051W	P36142	418 aa		4.82	□□□□□ -1.64
UTP5	YDR398W	SUL1	P38359	859 aa		4.82	□□□□□ -1.64
UTP5	YDR398W	UTP14	Q04500	899 aa	Known RBP	4.82	□□□□□ -1.64
UTP5	YDR398W	YOL073C	Q08232	322 aa		4.82	□□□□□ -1.64
UTP5	YDR398W	YBR259W	P38338	688 aa		4.81	□□□□□ -1.64
UTP5	YDR398W	SLI1	P53304	468 aa		4.81	□□□□□ -1.64
UTP5	YDR398W	YNL193W	P53870	558 aa		4.81	□□□□□ -1.64
UTP5	YDR398W	TGL5	Q12043	749 aa		4.81	□□□□□ -1.64
UTP5	YDR398W	CAF20	P12962	161 aa	Known RBP	4.8	□□□□□ -1.64
UTP5	YDR398W	RPL8A	P17076	256 aa	Known RBP	4.8	□□□□□ -1.64
UTP5	YDR398W	SFL1	P20134	766 aa		4.8	□□□□□ -1.64
UTP5	YDR398W	PCM1	P38628	557 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 276.3 ms