RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeastyeast

Gene SKP1, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKP1YDR328C MTF2P10849 440 aa7.83□□□□□ -1.16
SKP1YDR328C SWI3P32591 825 aa7.83□□□□□ -1.16
SKP1YDR328C RPT1P33299 467 aaKnown RBP7.83□□□□□ -1.16
SKP1YDR328C HXT8P40886 569 aa7.83□□□□□ -1.16
SKP1YDR328C MMM1P41800 426 aa7.83□□□□□ -1.16
SKP1YDR328C ULI1P43604 169 aa7.83□□□□□ -1.16
SKP1YDR328C OSW7P43611 510 aa7.83□□□□□ -1.16
SKP1YDR328C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
SKP1YDR328C ISM1P48526 1002 aa7.83□□□□□ -1.16
SKP1YDR328C PPM1Q04081 328 aa7.83□□□□□ -1.16
SKP1YDR328C IWR1Q07532 353 aaPredicted RBP7.83□□□□□ -1.16
SKP1YDR328C SHS1Q07657 551 aa7.83□□□□□ -1.16
SKP1YDR328C SGT2Q12118 346 aaKnown RBP7.83□□□□□ -1.16
SKP1YDR328C YDR524C-BQ3E6R4 66 aa7.83□□□□□ -1.16
SKP1YDR328C TOM70P07213 617 aaKnown RBP7.82□□□□□ -1.16
SKP1YDR328C SDH2P21801 266 aa7.82□□□□□ -1.16
SKP1YDR328C HXT1P32465 570 aa7.82□□□□□ -1.16
SKP1YDR328C STO1P34160 861 aaKnown RBP7.82□□□□□ -1.16
SKP1YDR328C KIC1P38692 1080 aa7.82□□□□□ -1.16
SKP1YDR328C EFM4P40516 257 aa7.82□□□□□ -1.16
SKP1YDR328C INP51P40559 946 aaKnown RBP7.82□□□□□ -1.16
SKP1YDR328C CPR7P47103 393 aa7.82□□□□□ -1.16
SKP1YDR328C TBF1Q02457 562 aa7.82□□□□□ -1.16
SKP1YDR328C ESC2Q06340 456 aa7.82□□□□□ -1.16
SKP1YDR328C RGA2Q06407 1009 aa7.82□□□□□ -1.16
SKP1YDR328C OPY2Q06810 360 aa7.82□□□□□ -1.16
SKP1YDR328C LDB19Q12502 818 aa7.82□□□□□ -1.16
SKP1YDR328C PCD1Q12524 340 aa7.82□□□□□ -1.16
SKP1YDR328C VPS13Q07878 3144 aa7.81□□□□□ -1.16
SKP1YDR328C ASP3-2P0CX77 362 aa7.81□□□□□ -1.16
SKP1YDR328C ASP3-3P0CX78 362 aa7.81□□□□□ -1.16
SKP1YDR328C ASP3-4P0CX79 362 aa7.81□□□□□ -1.16
SKP1YDR328C ASP3-1P0CZ17 362 aa7.81□□□□□ -1.16
SKP1YDR328C RPL4AP10664 362 aaKnown RBP7.81□□□□□ -1.16
SKP1YDR328C RAD57P25301 460 aa7.81□□□□□ -1.16
SKP1YDR328C BUD2P33314 1104 aa7.81□□□□□ -1.16
SKP1YDR328C TRM2P33753 639 aa7.81□□□□□ -1.16
SKP1YDR328C TRZ1P36159 838 aaPredicted RBP7.81□□□□□ -1.16
SKP1YDR328C JNM1P36224 373 aa7.81□□□□□ -1.16
SKP1YDR328C PTC4P38089 393 aa7.81□□□□□ -1.16
SKP1YDR328C MCX1P38323 520 aaPredicted RBP7.81□□□□□ -1.16
SKP1YDR328C UBX7P38349 436 aa7.81□□□□□ -1.16
SKP1YDR328C SEC9P40357 651 aa7.81□□□□□ -1.16
SKP1YDR328C CLA4P48562 842 aa7.81□□□□□ -1.16
SKP1YDR328C RPL4BP49626 362 aaKnown RBP7.81□□□□□ -1.16
SKP1YDR328C YPL034WQ03083 165 aa7.81□□□□□ -1.16
SKP1YDR328C YML082WQ04533 649 aaKnown RBP7.81□□□□□ -1.16
SKP1YDR328C TSR1Q07381 788 aaKnown RBP7.81□□□□□ -1.16
SKP1YDR328C DAS2Q12084 232 aa7.81□□□□□ -1.16
SKP1YDR328C YOL098CQ12496 1037 aa7.81□□□□□ -1.16
SKP1YDR328C ADE4P04046 510 aaKnown RBP7.8□□□□□ -1.16
SKP1YDR328C SNF1P06782 633 aaKnown RBP7.8□□□□□ -1.16
SKP1YDR328C COX11P19516 300 aaKnown RBP7.8□□□□□ -1.16
SKP1YDR328C DAL2P25335 343 aa7.8□□□□□ -1.16
SKP1YDR328C FUB1P25659 250 aa7.8□□□□□ -1.16
SKP1YDR328C POT1P27796 417 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
SKP1YDR328C PRR1P28708 518 aa7.8□□□□□ -1.16
SKP1YDR328C CSG2P35206 410 aa7.8□□□□□ -1.16
SKP1YDR328C CAB3P36076 571 aa7.8□□□□□ -1.16
SKP1YDR328C DRE2P36152 348 aa7.8□□□□□ -1.16
SKP1YDR328C SET5P38890 526 aaKnown RBP7.8□□□□□ -1.16
SKP1YDR328C YER186CP40101 306 aa7.8□□□□□ -1.16
SKP1YDR328C LAM5P43560 674 aa7.8□□□□□ -1.16
SKP1YDR328C SGM1P47166 707 aa7.8□□□□□ -1.16
SKP1YDR328C GCV2P49095 1034 aa7.8□□□□□ -1.16
SKP1YDR328C FMP30Q02883 468 aa7.8□□□□□ -1.16
SKP1YDR328C STE20Q03497 939 aaKnown RBP7.8□□□□□ -1.16
SKP1YDR328C SIL1Q08199 421 aa7.8□□□□□ -1.16
SKP1YDR328C AI5_BETAQ9ZZX0 354 aa7.8□□□□□ -1.16
SKP1YDR328C CDC33P07260 213 aaKnown RBP7.79□□□□□ -1.16
SKP1YDR328C YHL026CP38740 315 aa7.79□□□□□ -1.16
SKP1YDR328C YHR054CP38780 354 aa7.79□□□□□ -1.16
SKP1YDR328C CAJ1P39101 391 aa7.79□□□□□ -1.16
SKP1YDR328C APT1P49435 187 aaKnown RBP7.79□□□□□ -1.16
SKP1YDR328C YGR130CP53278 816 aa7.79□□□□□ -1.16
SKP1YDR328C YNL134CP53912 376 aaKnown RBP7.79□□□□□ -1.16
SKP1YDR328C BOP3P53958 396 aa7.79□□□□□ -1.16
SKP1YDR328C SOV1Q04748 898 aa7.79□□□□□ -1.16
SKP1YDR328C ABP140Q08641 628 aaKnown RBP7.79□□□□□ -1.16
SKP1YDR328C RNR1P21524 888 aaKnown RBP7.78□□□□□ -1.16
SKP1YDR328C RRT12P25381 491 aa7.78□□□□□ -1.16
SKP1YDR328C PAM1P37304 830 aaKnown RBP7.78□□□□□ -1.16
SKP1YDR328C POA1P38218 177 aa7.78□□□□□ -1.16
SKP1YDR328C EXO5P38289 585 aa7.78□□□□□ -1.16
SKP1YDR328C TCD1P38756 429 aa7.78□□□□□ -1.16
SKP1YDR328C YMR124WP39523 943 aaKnown RBP7.78□□□□□ -1.16
SKP1YDR328C ZAP1P47043 880 aa7.78□□□□□ -1.16
SKP1YDR328C YGR021WP53212 290 aa7.78□□□□□ -1.16
SKP1YDR328C YGR035CP53222 116 aa7.78□□□□□ -1.16
SKP1YDR328C ALG11P53954 548 aaKnown RBP7.78□□□□□ -1.16
SKP1YDR328C SYH1Q02875 849 aaKnown RBP7.78□□□□□ -1.16
SKP1YDR328C NGL3Q03210 505 aa7.78□□□□□ -1.16
SKP1YDR328C CEF1Q03654 590 aaPredicted RBP7.78□□□□□ -1.16
SKP1YDR328C SML1Q04964 104 aa7.78□□□□□ -1.16
SKP1YDR328C OSH2Q12451 1283 aa7.78□□□□□ -1.16
SKP1YDR328C ECM3Q99252 613 aa7.78□□□□□ -1.16
SKP1YDR328C RPS3P05750 240 aaKnown RBP7.77□□□□□ -1.17
SKP1YDR328C SPT2P06843 333 aaPredicted RBP7.77□□□□□ -1.17
SKP1YDR328C TIF1P10081 395 aaKnown RBP7.77□□□□□ -1.17
SKP1YDR328C PET123P17558 318 aa7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms