RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 ZIP2P53061 704 aa10.43□□□□□ -0.74
NME1NME1 RPN7Q06103 429 aaKnown RBP10.43□□□□□ -0.74
NME1NME1 EUG1P32474 517 aa10.42□□□□□ -0.74
NME1NME1 OMA1P36163 345 aa10.42□□□□□ -0.74
NME1NME1 PLB2Q03674 706 aa10.42□□□□□ -0.74
NME1NME1 ADY3Q07732 790 aa10.42□□□□□ -0.74
NME1NME1 POL12P38121 705 aaPredicted RBP10.41□□□□□ -0.74
NME1NME1 LAM1P38851 1228 aa10.41□□□□□ -0.74
NME1NME1 BNA2P47125 453 aa10.41□□□□□ -0.74
NME1NME1 YPL277CQ08989 487 aa10.41□□□□□ -0.74
NME1NME1 YKR051WP36142 418 aa10.4□□□□□ -0.74
NME1NME1 YBR071WP38243 211 aa10.4□□□□□ -0.74
NME1NME1 TDA3P38758 523 aa10.4□□□□□ -0.74
NME1NME1 OAF1P39720 1047 aaPredicted RBP10.4□□□□□ -0.74
NME1NME1 RET2P43621 546 aa10.4□□□□□ -0.74
NME1NME1 YGR153WP48238 217 aa10.4□□□□□ -0.74
NME1NME1 DFG16Q99234 619 aa10.4□□□□□ -0.74
NME1NME1 CTF8P38877 133 aa10.39□□□□□ -0.75
NME1NME1 NIT1P40447 199 aa10.39□□□□□ -0.75
NME1NME1 SDP1P40479 209 aa10.39□□□□□ -0.75
NME1NME1 MET12P46151 657 aa10.39□□□□□ -0.75
NME1NME1 RTS3P53289 263 aa10.39□□□□□ -0.75
NME1NME1 WHI4Q07655 649 aaKnown RBP10.39□□□□□ -0.75
NME1NME1 SED4P25365 1065 aa10.38□□□□□ -0.75
NME1NME1 FLR1P38124 548 aa10.38□□□□□ -0.75
NME1NME1 YHR078WP38799 552 aa10.38□□□□□ -0.75
NME1NME1 YLR149CQ99296 730 aa10.38□□□□□ -0.75
NME1NME1 URM1P40554 99 aaPredicted RBP10.37□□□□□ -0.75
NME1NME1 MNN11P46985 422 aaKnown RBP10.37□□□□□ -0.75
NME1NME1 SSY5P47002 699 aa10.37□□□□□ -0.75
NME1NME1 GCV2P49095 1034 aa10.37□□□□□ -0.75
NME1NME1 MRPL22P53881 309 aa10.37□□□□□ -0.75
NME1NME1 COG6P53959 839 aa10.37□□□□□ -0.75
NME1NME1 Q0142Q9ZZW4 58 aa10.37□□□□□ -0.75
NME1NME1 YKR018CP36114 725 aa10.36□□□□□ -0.75
NME1NME1 NOP2P40991 618 aaKnown RBP10.36□□□□□ -0.75
NME1NME1 DUG1P43616 481 aaKnown RBP10.36□□□□□ -0.75
NME1NME1 INP52P50942 1183 aa10.36□□□□□ -0.75
NME1NME1 GPB1Q08886 897 aa10.36□□□□□ -0.75
NME1NME1 HIS5P07172 385 aa10.35□□□□□ -0.75
NME1NME1 MEF2P39677 819 aa10.35□□□□□ -0.75
NME1NME1 YOL057WQ08225 711 aa10.35□□□□□ -0.75
NME1NME1 UPC2Q12151 913 aa10.35□□□□□ -0.75
NME1NME1 CCT5P40413 562 aaKnown RBP10.34□□□□□ -0.75
NME1NME1 PEX14P53112 341 aa10.34□□□□□ -0.75
NME1NME1 PEX8P53248 589 aa10.34□□□□□ -0.75
NME1NME1 RXT3Q07458 294 aa10.34□□□□□ -0.75
NME1NME1 DID4P36108 232 aa10.33□□□□□ -0.76
NME1NME1 ECL1P48235 211 aa10.33□□□□□ -0.76
NME1NME1 GCN5Q03330 439 aa10.33□□□□□ -0.76
NME1NME1 HMI1Q12039 706 aa10.33□□□□□ -0.76
NME1NME1 AEP2P22136 580 aa10.32□□□□□ -0.76
NME1NME1 EMC1P25574 760 aa10.32□□□□□ -0.76
NME1NME1 ENP1P38333 483 aaKnown RBP10.32□□□□□ -0.76
NME1NME1 PZF1P39933 429 aa10.32□□□□□ -0.76
NME1NME1 ATG36P46983 293 aa10.32□□□□□ -0.76
NME1NME1 MTR3P48240 250 aaPredicted RBP10.32□□□□□ -0.76
NME1NME1 PCL10P53124 433 aa10.32□□□□□ -0.76
NME1NME1 TMA7Q3E764 64 aaKnown RBP10.32□□□□□ -0.76
NME1NME1 LRG1P35688 1017 aa10.31□□□□□ -0.76
NME1NME1 BFA1P47113 574 aa10.31□□□□□ -0.76
NME1NME1 VPS62P53285 467 aa10.31□□□□□ -0.76
NME1NME1 ECM9Q02202 377 aa10.31□□□□□ -0.76
NME1NME1 DUS4Q06063 367 aa10.31□□□□□ -0.76
NME1NME1 MAC1P35192 417 aa10.3□□□□□ -0.76
NME1NME1 SAK1P38990 1142 aa10.3□□□□□ -0.76
NME1NME1 NOP12Q08208 459 aaKnown RBP10.3□□□□□ -0.76
NME1NME1 RMP1Q12530 201 aa10.3□□□□□ -0.76
NME1NME1 CDC6P09119 513 aa10.29□□□□□ -0.76
NME1NME1 STE14P32584 239 aa10.29□□□□□ -0.76
NME1NME1 MNN4P36044 1178 aa10.29□□□□□ -0.76
NME1NME1 MAL31P38156 614 aa10.29□□□□□ -0.76
NME1NME1 CHA4P43634 648 aa10.29□□□□□ -0.76
NME1NME1 YAP6Q03935 383 aa10.28□□□□□ -0.76
NME1NME1 ACK1Q07622 623 aaPredicted RBP10.28□□□□□ -0.76
NME1NME1 SWM1Q12379 170 aa10.28□□□□□ -0.76
NME1NME1 NIT2P47016 307 aa10.27□□□□□ -0.77
NME1NME1 NCS6P53088 359 aa10.27□□□□□ -0.77
NME1NME1 ORC4P54791 529 aa10.27□□□□□ -0.77
NME1NME1 TFC4P33339 1025 aa10.26□□□□□ -0.77
NME1NME1 MIP6P38760 659 aaKnown RBP10.26□□□□□ -0.77
NME1NME1 SPT20P50875 604 aa10.26□□□□□ -0.77
NME1NME1 PTA1Q01329 785 aaPredicted RBP10.26□□□□□ -0.77
NME1NME1 YDR132CQ03900 495 aa10.26□□□□□ -0.77
NME1NME1 YHM2Q04013 314 aa10.26□□□□□ -0.77
NME1NME1 DCS2Q12123 353 aa10.26□□□□□ -0.77
NME1NME1 PLC1P32383 869 aa10.25□□□□□ -0.77
NME1NME1 NGG1P32494 702 aa10.25□□□□□ -0.77
NME1NME1 GPP2P40106 250 aaKnown RBP10.25□□□□□ -0.77
NME1NME1 TPM2P40414 161 aa10.25□□□□□ -0.77
NME1NME1 GPD1Q00055 391 aaKnown RBP10.25□□□□□ -0.77
NME1NME1 SND1Q04007 877 aa10.25□□□□□ -0.77
NME1NME1 MUS81Q04149 632 aaPredicted RBP10.25□□□□□ -0.77
NME1NME1 NPC2Q12408 173 aa10.25□□□□□ -0.77
NME1NME1 CDC20P26309 610 aa10.24□□□□□ -0.77
NME1NME1 YKR075CP36155 307 aa10.24□□□□□ -0.77
NME1NME1 VHR1P40522 640 aa10.24□□□□□ -0.77
NME1NME1 PFA3P42836 336 aa10.24□□□□□ -0.77
NME1NME1 YJR039WP47107 1121 aa10.24□□□□□ -0.77
NME1NME1 ASI2P53895 289 aa10.24□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 102.8 ms