RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 CCDC191Q8NCU4 936 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 MLH3Q9UHC1 1453 aa12.79□□□□□ -0.36
SCN1B-208ENST00000640135 WTAPQ15007 396 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 TEX35Q5T0J7 233 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCN1B-208ENST00000640135 MCMDC2Q4G0Z9 681 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 SUPT20HQ8NEM7 779 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 ZNF397Q8NF99 534 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-208ENST00000640135 CALML4Q96GE6 196 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 VAMP4O75379 141 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 PDE6BP35913 854 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 CETN2P41208 172 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 MAP3K11Q16584 847 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 ARHGEF5Q12774 1597 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 CALM1P0DP23 149 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 CALM2P0DP24 149 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 CALM3P0DP25 149 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 SLC4A4Q9Y6R1 1079 aa12.78□□□□□ -0.36
SCN1B-208ENST00000640135 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.36
SCN1B-208ENST00000640135 HOOK2Q96ED9 719 aa12.77□□□□□ -0.36
SCN1B-208ENST00000640135 DENND2AQ9ULE3 1009 aa12.77□□□□□ -0.36
SCN1B-208ENST00000640135 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.36
SCN1B-208ENST00000640135 MAST3O60307 1309 aa12.77□□□□□ -0.36
SCN1B-208ENST00000640135 PLEKHG1Q9ULL1 1385 aa12.77□□□□□ -0.37
SCN1B-208ENST00000640135 CETN1Q12798 172 aa12.77□□□□□ -0.37
SCN1B-208ENST00000640135 SLC9C2Q5TAH2 1124 aa12.77□□□□□ -0.37
SCN1B-208ENST00000640135 CCDC150Q8NCX0 1101 aa12.77□□□□□ -0.37
SCN1B-208ENST00000640135 CCDC87Q9NVE4 849 aa12.77□□□□□ -0.37
SCN1B-208ENST00000640135 EIF5P55010 431 aaKnown RBP12.77□□□□□ -0.37
SCN1B-208ENST00000640135 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.37
SCN1B-208ENST00000640135 ERMNQ8TAM6 284 aa12.77□□□□□ -0.37
SCN1B-208ENST00000640135 SLC52A2Q9HAB3 445 aa12.77□□□□□ -0.37
SCN1B-208ENST00000640135 ANAPC15P60006 121 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 NUCB1Q02818 461 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 SH2D4AQ9H788 454 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 LDHBP07195 334 aaKnown RBP12.76□□□□□ -0.37
SCN1B-208ENST00000640135 IL13P35225 146 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 KANK3Q6NY19 840 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 ANO10Q9NW15 660 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 ORC3Q9UBD5 711 aaPredicted RBP12.76□□□□□ -0.37
SCN1B-208ENST00000640135 MAGEB6P1A0A0J9YX57 407 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
SCN1B-208ENST00000640135 FKBP15Q5T1M5 1219 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
SCN1B-208ENST00000640135 VPS36Q86VN1 386 aa12.76□□□□□ -0.37
SCN1B-208ENST00000640135 LTKP29376 864 aa12.75□□□□□ -0.37
SCN1B-208ENST00000640135 PDE1AP54750 535 aa12.75□□□□□ -0.37
SCN1B-208ENST00000640135 PDE8AO60658 829 aa12.75□□□□□ -0.37
SCN1B-208ENST00000640135 IFIT1BQ5T764 474 aaKnown RBP12.75□□□□□ -0.37
SCN1B-208ENST00000640135 CCDC82Q8N4S0 544 aa12.75□□□□□ -0.37
SCN1B-208ENST00000640135 JARID2Q92833 1246 aaPredicted RBP12.75□□□□□ -0.37
SCN1B-208ENST00000640135 PAG1Q9NWQ8 432 aa12.75□□□□□ -0.37
SCN1B-208ENST00000640135 ZBTB43O43298 467 aa12.75□□□□□ -0.37
SCN1B-208ENST00000640135 METTL22Q9BUU2 404 aaPredicted RBP12.75□□□□□ -0.37
SCN1B-208ENST00000640135 UBA7P41226 1012 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
SCN1B-208ENST00000640135 YEATS2Q9ULM3 1422 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 ARAP3Q8WWN8 1544 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 FERMT3Q86UX7 667 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 MICU3Q86XE3 530 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
SCN1B-208ENST00000640135 TRPC5Q9UL62 973 aaPredicted RBP12.74□□□□□ -0.37
SCN1B-208ENST00000640135 H0YIN7 160 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 TBC1D9Q6ZT07 1266 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 NLRP1Q9C000 1473 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 RAD50Q92878 1312 aa12.74□□□□□ -0.37
SCN1B-208ENST00000640135 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
SCN1B-208ENST00000640135 TTLL5Q6EMB2 1281 aa12.73□□□□□ -0.37
SCN1B-208ENST00000640135 IQCEQ6IPM2 695 aa12.73□□□□□ -0.37
SCN1B-208ENST00000640135 TMEM94Q12767 1356 aa12.73□□□□□ -0.37
SCN1B-208ENST00000640135 RNF113AO15541 343 aaKnown RBP12.73□□□□□ -0.37
SCN1B-208ENST00000640135 RBM25P49756 843 aaKnown RBP12.73□□□□□ -0.37
SCN1B-208ENST00000640135 HAND2P61296 217 aa12.73□□□□□ -0.37
SCN1B-208ENST00000640135 SBNO2Q9Y2G9 1366 aa12.73□□□□□ -0.37
SCN1B-208ENST00000640135 MCM4P33991 863 aa12.73□□□□□ -0.37
SCN1B-208ENST00000640135 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
SCN1B-208ENST00000640135 DDX19AQ9NUU7 478 aaKnown RBP12.73□□□□□ -0.37
SCN1B-208ENST00000640135 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-208ENST00000640135 CCDC181Q5TID7 509 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 ZNF772Q68DY9 489 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-208ENST00000640135 TMEM87AQ8NBN3 555 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 VEZTQ9HBM0 779 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCN1B-208ENST00000640135 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 EFCAB6Q5THR3 1501 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 RTL9Q8NET4 1388 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 EYA2O00167 538 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 CALML3P27482 149 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
SCN1B-208ENST00000640135 CCT2P78371 535 aaKnown RBP12.72□□□□□ -0.37
SCN1B-208ENST00000640135 SETQ01105 290 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-208ENST00000640135 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms