RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 GOLIM4O00461 696 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 ANAPC15P60006 121 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 TPRNQ4KMQ1 711 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 RUFY2Q8WXA3 655 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 COL15A1P39059 1388 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 MAP3K15Q6ZN16 1313 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 BAG4O95429 457 aaKnown RBP18.5■□□□□ 0.55
SCN8A-214ENST00000637709 LARGE1O95461 756 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 ADORA1P30542 326 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 CCDC57Q2TAC2 916 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 GBP4Q96PP9 640 aa18.5■□□□□ 0.55
SCN8A-214ENST00000637709 COL22A1Q8NFW1 1626 aaPredicted RBP18.5■□□□□ 0.55
SCN8A-214ENST00000637709 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
SCN8A-214ENST00000637709 A0A1B0GUL7 405 aa18.49■□□□□ 0.55
SCN8A-214ENST00000637709 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
SCN8A-214ENST00000637709 GREM2Q9H772 168 aa18.49■□□□□ 0.55
SCN8A-214ENST00000637709 EYA2O00167 538 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 ATP5JP18859 108 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 TAF7LQ5H9L4 462 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 GIGYF2Q6Y7W6 1299 aaKnown RBP18.48■□□□□ 0.55
SCN8A-214ENST00000637709 NLRP10Q86W26 655 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 WNK3Q9BYP7 1800 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 UBAP1LF5GYI3 381 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 HSP90AB3PQ58FF7 597 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 PI16Q6UXB8 463 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 RUFY3Q7L099 469 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 UBN2Q6ZU65 1347 aa18.48■□□□□ 0.55
SCN8A-214ENST00000637709 NUP98P52948 1817 aa18.47■□□□□ 0.55
SCN8A-214ENST00000637709 DDX11L8A8MPP1 907 aa18.47■□□□□ 0.55
SCN8A-214ENST00000637709 TEX13AQ9BXU3 409 aaPredicted RBP18.47■□□□□ 0.55
SCN8A-214ENST00000637709 TRMT112Q9UI30 125 aaKnown RBP18.47■□□□□ 0.55
SCN8A-214ENST00000637709 ITPK1Q13572 414 aa18.47■□□□□ 0.55
SCN8A-214ENST00000637709 CREB3L3Q68CJ9 461 aa18.47■□□□□ 0.55
SCN8A-214ENST00000637709 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
SCN8A-214ENST00000637709 FKBP4Q02790 459 aaKnown RBP eCLIP18.46■□□□□ 0.55
SCN8A-214ENST00000637709 NECTIN1Q15223 517 aa18.46■□□□□ 0.55
SCN8A-214ENST00000637709 ZNF609O15014 1411 aa18.46■□□□□ 0.55
SCN8A-214ENST00000637709 NRAPQ86VF7 1730 aa18.46■□□□□ 0.55
SCN8A-214ENST00000637709 A0A0G2JLW4 131 aa18.46■□□□□ 0.55
SCN8A-214ENST00000637709 ZBTB38Q8NAP3 1195 aaPredicted RBP18.46■□□□□ 0.55
SCN8A-214ENST00000637709 SNAP23O00161 211 aa18.45■□□□□ 0.54
SCN8A-214ENST00000637709 CYP2E1P05181 493 aaPredicted RBP18.45■□□□□ 0.54
SCN8A-214ENST00000637709 HCLS1P14317 486 aaPredicted RBP18.45■□□□□ 0.54
SCN8A-214ENST00000637709 IL15P40933 162 aaPredicted RBP18.45■□□□□ 0.54
SCN8A-214ENST00000637709 NGLY1Q96IV0 654 aa18.45■□□□□ 0.54
SCN8A-214ENST00000637709 TTC14Q96N46 770 aa18.45■□□□□ 0.54
SCN8A-214ENST00000637709 MYH14Q7Z406 1995 aaKnown RBP18.45■□□□□ 0.54
SCN8A-214ENST00000637709 SLC27A2O14975 620 aa18.45■□□□□ 0.54
SCN8A-214ENST00000637709 NCLP19338 710 aaKnown RBP18.45■□□□□ 0.54
SCN8A-214ENST00000637709 ITGA6P23229 1130 aa18.45■□□□□ 0.54
SCN8A-214ENST00000637709 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
SCN8A-214ENST00000637709 VPS53Q5VIR6 699 aa18.45■□□□□ 0.54
SCN8A-214ENST00000637709 HELBQ8NG08 1087 aaPredicted RBP18.45■□□□□ 0.54
SCN8A-214ENST00000637709 RTN4Q9NQC3 1192 aaKnown RBP18.45■□□□□ 0.54
SCN8A-214ENST00000637709 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
SCN8A-214ENST00000637709 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
SCN8A-214ENST00000637709 LRP6O75581 1613 aa18.44■□□□□ 0.54
SCN8A-214ENST00000637709 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
SCN8A-214ENST00000637709 PCCAP05165 728 aaPredicted RBP18.44■□□□□ 0.54
SCN8A-214ENST00000637709 IFIT5Q13325 482 aaKnown RBP18.44■□□□□ 0.54
SCN8A-214ENST00000637709 SCARF1Q14162 830 aa18.44■□□□□ 0.54
SCN8A-214ENST00000637709 NECAB1Q8N987 351 aa18.44■□□□□ 0.54
SCN8A-214ENST00000637709 MAP4K1Q92918 833 aa18.44■□□□□ 0.54
SCN8A-214ENST00000637709 HAUS7Q99871 368 aa18.44■□□□□ 0.54
SCN8A-214ENST00000637709 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
SCN8A-214ENST00000637709 SIK1P57059 783 aa18.44■□□□□ 0.54
SCN8A-214ENST00000637709 INTS5Q6P9B9 1019 aaKnown RBP18.44■□□□□ 0.54
SCN8A-214ENST00000637709 PAG1Q9NWQ8 432 aa18.44■□□□□ 0.54
SCN8A-214ENST00000637709 TOM1O60784 492 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 NUCB2P80303 420 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 CCDC83Q8IWF9 413 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 GDPD2Q9HCC8 539 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 PDRG1Q9NUG6 133 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 CEP126Q9P2H0 1117 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 TCHHQ07283 1943 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 IFIT1P09914 478 aaKnown RBP18.43■□□□□ 0.54
SCN8A-214ENST00000637709 GORABQ5T7V8 394 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 TTLL11Q8NHH1 800 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 SLIT2O94813 1529 aa18.43■□□□□ 0.54
SCN8A-214ENST00000637709 MED23Q9ULK4 1368 aa18.42■□□□□ 0.54
SCN8A-214ENST00000637709 PRPF40AO75400 957 aaKnown RBP18.42■□□□□ 0.54
SCN8A-214ENST00000637709 TAF5LO75529 589 aa18.42■□□□□ 0.54
SCN8A-214ENST00000637709 CUL4AQ13619 759 aa18.42■□□□□ 0.54
SCN8A-214ENST00000637709 XAGE2Q96GT9 111 aa18.42■□□□□ 0.54
SCN8A-214ENST00000637709 CWC22Q9HCG8 908 aaKnown RBP18.42■□□□□ 0.54
SCN8A-214ENST00000637709 LDHAL6AQ6ZMR3 332 aa18.42■□□□□ 0.54
SCN8A-214ENST00000637709 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
SCN8A-214ENST00000637709 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
SCN8A-214ENST00000637709 DDX49Q9Y6V7 483 aaKnown RBP18.41■□□□□ 0.54
SCN8A-214ENST00000637709 MCM2P49736 904 aa18.41■□□□□ 0.54
SCN8A-214ENST00000637709 STK3Q13188 491 aa18.41■□□□□ 0.54
SCN8A-214ENST00000637709 SUSD4Q5VX71 490 aa18.41■□□□□ 0.54
SCN8A-214ENST00000637709 PANK2Q9BZ23 570 aa18.41■□□□□ 0.54
SCN8A-214ENST00000637709 CNNM1Q9NRU3 951 aa18.41■□□□□ 0.54
SCN8A-214ENST00000637709 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
SCN8A-214ENST00000637709 HIP1O00291 1037 aa18.4■□□□□ 0.54
SCN8A-214ENST00000637709 CTSWP56202 376 aa18.4■□□□□ 0.54
SCN8A-214ENST00000637709 METTL24Q5JXM2 366 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms