RNA–Protein interactions for RNA: ENST00000628360.1

TCF4-263, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-263ENST00000628360 JDP2Q8WYK2 163 aa10.58□□□□□ -0.72
TCF4-263ENST00000628360 GJA3Q9Y6H8 435 aa10.58□□□□□ -0.72
TCF4-263ENST00000628360 PCNTO95613 3336 aa10.58□□□□□ -0.72
TCF4-263ENST00000628360 RNF123Q5XPI4 1314 aa10.58□□□□□ -0.72
TCF4-263ENST00000628360 HSPA1AP0DMV8 641 aaKnown RBP10.57□□□□□ -0.72
TCF4-263ENST00000628360 HSPA1BP0DMV9 641 aaKnown RBP10.57□□□□□ -0.72
TCF4-263ENST00000628360 EPHX2P34913 555 aa10.57□□□□□ -0.72
TCF4-263ENST00000628360 TMPOP42166 694 aaKnown RBP10.57□□□□□ -0.72
TCF4-263ENST00000628360 RALBP1Q15311 655 aa10.57□□□□□ -0.72
TCF4-263ENST00000628360 CRY2Q49AN0 593 aa10.57□□□□□ -0.72
TCF4-263ENST00000628360 GIGYF2Q6Y7W6 1299 aaKnown RBP10.57□□□□□ -0.72
TCF4-263ENST00000628360 LDHDQ86WU2 507 aa10.57□□□□□ -0.72
TCF4-263ENST00000628360 ZNF34Q8IZ26 560 aa10.57□□□□□ -0.72
TCF4-263ENST00000628360 RBM17Q96I25 401 aaKnown RBP10.57□□□□□ -0.72
TCF4-263ENST00000628360 L3MBTL3Q96JM7 780 aaPredicted RBP10.57□□□□□ -0.72
TCF4-263ENST00000628360 HACL1Q9UJ83 578 aa10.57□□□□□ -0.72
TCF4-263ENST00000628360 ARFGEF2Q9Y6D5 1785 aa10.57□□□□□ -0.72
TCF4-263ENST00000628360 NUP98P52948 1817 aa10.56□□□□□ -0.72
TCF4-263ENST00000628360 PPEF1O14829 653 aaPredicted RBP10.56□□□□□ -0.72
TCF4-263ENST00000628360 NTSR2O95665 410 aa10.56□□□□□ -0.72
TCF4-263ENST00000628360 PDIA6Q15084 440 aa10.56□□□□□ -0.72
TCF4-263ENST00000628360 KRT24Q2M2I5 525 aa10.56□□□□□ -0.72
TCF4-263ENST00000628360 COPS6Q7L5N1 327 aa10.56□□□□□ -0.72
TCF4-263ENST00000628360 PPP1R42Q7Z4L9 355 aa10.56□□□□□ -0.72
TCF4-263ENST00000628360 TNS4Q8IZW8 715 aa10.56□□□□□ -0.72
TCF4-263ENST00000628360 LARGE2Q8N3Y3 721 aa10.56□□□□□ -0.72
TCF4-263ENST00000628360 UTP14AQ9BVJ6 771 aaKnown RBP10.56□□□□□ -0.72
TCF4-263ENST00000628360 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.56□□□□□ -0.72
TCF4-263ENST00000628360 FZD9O00144 591 aa10.55□□□□□ -0.72
TCF4-263ENST00000628360 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
TCF4-263ENST00000628360 EIF6P56537 245 aaKnown RBP10.55□□□□□ -0.72
TCF4-263ENST00000628360 LMOD3Q0VAK6 560 aa10.55□□□□□ -0.72
TCF4-263ENST00000628360 WDR43Q15061 677 aaKnown RBP eCLIP10.55□□□□□ -0.72
TCF4-263ENST00000628360 MAP1SQ66K74 1059 aaPredicted RBP10.55□□□□□ -0.72
TCF4-263ENST00000628360 XAGE3Q8WTP9 111 aa10.55□□□□□ -0.72
TCF4-263ENST00000628360 NLRP3Q96P20 1036 aa10.55□□□□□ -0.72
TCF4-263ENST00000628360 PSMD1Q99460 953 aa10.55□□□□□ -0.72
TCF4-263ENST00000628360 TMX4Q9H1E5 349 aaPredicted RBP10.55□□□□□ -0.72
TCF4-263ENST00000628360 ERBB4Q15303 1308 aa10.55□□□□□ -0.72
TCF4-263ENST00000628360 HOXA10P31260 410 aaPredicted RBP10.54□□□□□ -0.72
TCF4-263ENST00000628360 PARP10Q53GL7 1025 aa10.54□□□□□ -0.72
TCF4-263ENST00000628360 CC2D2BQ6DHV5 1058 aa10.54□□□□□ -0.72
TCF4-263ENST00000628360 LRP10Q7Z4F1 713 aa10.54□□□□□ -0.72
TCF4-263ENST00000628360 GPC2Q8N158 579 aa10.54□□□□□ -0.72
TCF4-263ENST00000628360 PDCD7Q8N8D1 485 aaKnown RBP10.54□□□□□ -0.72
TCF4-263ENST00000628360 CRAMP1Q96RY5 1269 aa10.54□□□□□ -0.72
TCF4-263ENST00000628360 TMEM121BQ9BXQ6 578 aaPredicted RBP10.54□□□□□ -0.72
TCF4-263ENST00000628360 PASKQ96RG2 1323 aa10.54□□□□□ -0.72
TCF4-263ENST00000628360 MYBBP1AQ9BQG0 1328 aaKnown RBP10.54□□□□□ -0.72
TCF4-263ENST00000628360 TMEM88BA6NKF7 163 aa10.53□□□□□ -0.72
TCF4-263ENST00000628360 PPIP5K2O43314 1243 aa10.53□□□□□ -0.72
TCF4-263ENST00000628360 ITGBL1O95965 494 aaPredicted RBP10.53□□□□□ -0.72
TCF4-263ENST00000628360 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
TCF4-263ENST00000628360 EPS15P42566 896 aa10.53□□□□□ -0.72
TCF4-263ENST00000628360 AOC3Q16853 763 aa10.53□□□□□ -0.72
TCF4-263ENST00000628360 NIM1KQ8IY84 436 aa10.53□□□□□ -0.72
TCF4-263ENST00000628360 CNTROBQ8N137 903 aa10.53□□□□□ -0.72
TCF4-263ENST00000628360 CHPF2Q9P2E5 772 aa10.53□□□□□ -0.72
TCF4-263ENST00000628360 TRMT112Q9UI30 125 aaKnown RBP10.53□□□□□ -0.72
TCF4-263ENST00000628360 COL4A5P29400 1685 aa10.53□□□□□ -0.72
TCF4-263ENST00000628360 IBTKQ9P2D0 1353 aaPredicted RBP10.52□□□□□ -0.72
TCF4-263ENST00000628360 CHL1O00533 1208 aa10.52□□□□□ -0.73
TCF4-263ENST00000628360 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.73
TCF4-263ENST00000628360 NLRP10Q86W26 655 aa10.52□□□□□ -0.73
TCF4-263ENST00000628360 RUNDC1Q96C34 613 aa10.52□□□□□ -0.73
TCF4-263ENST00000628360 ABT1Q9ULW3 272 aaKnown RBP10.52□□□□□ -0.73
TCF4-263ENST00000628360 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
TCF4-263ENST00000628360 ABCC4O15439 1325 aa10.52□□□□□ -0.73
TCF4-263ENST00000628360 SCN4AP35499 1836 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 SNED1Q8TER0 1413 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 SNPHO15079 494 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 VEGFBP49765 207 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 VASPP50552 380 aaPredicted RBP10.51□□□□□ -0.73
TCF4-263ENST00000628360 FMR1Q06787 632 aaKnown RBP eCLIP10.51□□□□□ -0.73
TCF4-263ENST00000628360 GRM1Q13255 1194 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 TCIRG1Q13488 830 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 GSE1Q14687 1217 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 HSP90AB3PQ58FF7 597 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
TCF4-263ENST00000628360 SLC10A5Q5PT55 438 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 HDGFL1Q5TGJ6 251 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 DPP8Q6V1X1 898 aaPredicted RBP10.51□□□□□ -0.73
TCF4-263ENST00000628360 ZNF467Q7Z7K2 595 aaPredicted RBP10.51□□□□□ -0.73
TCF4-263ENST00000628360 DDX21Q9NR30 783 aaKnown RBP eCLIP10.51□□□□□ -0.73
TCF4-263ENST00000628360 BABAM1Q9NWV8 329 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 ATP6V0A2Q9Y487 856 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 CNTNAP1P78357 1384 aa10.51□□□□□ -0.73
TCF4-263ENST00000628360 ATP5J2-PTCD1G3V325 749 aa10.5□□□□□ -0.73
TCF4-263ENST00000628360 SCNN1DP51172 638 aa10.5□□□□□ -0.73
TCF4-263ENST00000628360 GRIPAP1Q4V328 841 aa10.5□□□□□ -0.73
TCF4-263ENST00000628360 PAXIP1Q6ZW49 1069 aaPredicted RBP10.5□□□□□ -0.73
TCF4-263ENST00000628360 DDX46Q7L014 1031 aaKnown RBP10.5□□□□□ -0.73
TCF4-263ENST00000628360 MPNDQ8N594 471 aa10.5□□□□□ -0.73
TCF4-263ENST00000628360 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
TCF4-263ENST00000628360 SH3TC1Q8TE82 1336 aa10.5□□□□□ -0.73
TCF4-263ENST00000628360 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
TCF4-263ENST00000628360 TRAF5O00463 557 aa10.49□□□□□ -0.73
TCF4-263ENST00000628360 ELL2O00472 640 aaPredicted RBP10.49□□□□□ -0.73
TCF4-263ENST00000628360 FOXN1O15353 648 aa10.49□□□□□ -0.73
TCF4-263ENST00000628360 RAD17O75943 681 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms