RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 PTPRTO14522 1441 aa4.1□□□□□ -1.75
SCN8A-210ENST00000627665 MED1Q15648 1581 aaPredicted RBP4.1□□□□□ -1.75
SCN8A-210ENST00000627665 ZBTB39O15060 712 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 MICAL2O94851 1124 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 GTF2F1P35269 517 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCN8A-210ENST00000627665 SLC19A1P41440 591 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 NNTQ13423 1086 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 BICDL1Q6ZP65 573 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 METTL16Q86W50 562 aaKnown RBP4.09□□□□□ -1.75
SCN8A-210ENST00000627665 ETFBKMTQ8IXQ9 262 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 SNX29Q8TEQ0 813 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 PMEPA1Q969W9 287 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 MRGPRX2Q96LB1 330 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 KRTAP3-3Q9BYR6 98 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 KRTAP3-2Q9BYR7 98 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 ZDHHC3Q9NYG2 299 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 TMA7Q9Y2S6 64 aaKnown RBP4.09□□□□□ -1.75
SCN8A-210ENST00000627665 HRH3Q9Y5N1 445 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 IGF1RP08069 1367 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 UHRF1BP1Q6BDS2 1440 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 FANCAO15360 1455 aa4.09□□□□□ -1.75
SCN8A-210ENST00000627665 LTBP4Q8N2S1 1624 aa4.09□□□□□ -1.76
SCN8A-210ENST00000627665 BIVM-ERCC5R4GMW8 1640 aa4.09□□□□□ -1.76
SCN8A-210ENST00000627665 TGFBR3LH3BV60 316 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 CLSTN1O94985 981 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 IGHA2P01877 340 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 NR3C2P08235 984 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 DNAJA1P31689 397 aaKnown RBP4.08□□□□□ -1.76
SCN8A-210ENST00000627665 HSPA1LP34931 641 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 RAD51AP2Q09MP3 1159 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 TAF1CQ15572 869 aaPredicted RBP4.08□□□□□ -1.76
SCN8A-210ENST00000627665 PLA2G2CQ5R387 149 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 IER5Q5VY09 327 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 DIEXFQ68CQ4 756 aaKnown RBP4.08□□□□□ -1.76
SCN8A-210ENST00000627665 PDE12Q6L8Q7 609 aaKnown RBP4.08□□□□□ -1.76
SCN8A-210ENST00000627665 Q6ZVU0 165 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 DPH6Q7L8W6 267 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 ZNF438Q7Z4V0 828 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 USP48Q86UV5 1035 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 SNIP1Q8TAD8 396 aaKnown RBP4.08□□□□□ -1.76
SCN8A-210ENST00000627665 DISP1Q96F81 1524 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 FHDC1Q9C0D6 1143 aaPredicted RBP4.08□□□□□ -1.76
SCN8A-210ENST00000627665 FAM8A1Q9UBU6 413 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 GGT7Q9UJ14 662 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 PARP3Q9Y6F1 533 aa4.08□□□□□ -1.76
SCN8A-210ENST00000627665 IQGAP2Q13576 1575 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 ARHGEF40Q8TER5 1519 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 NEO1Q92859 1461 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 AKNAQ7Z591 1439 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 CARMIL1Q5VZK9 1371 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 TTC24A2A3L6 582 aaPredicted RBP4.07□□□□□ -1.76
SCN8A-210ENST00000627665 PPM1GO15355 546 aaPredicted RBP4.07□□□□□ -1.76
SCN8A-210ENST00000627665 PHACTR2O75167 634 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 STK10O94804 968 aaKnown RBP4.07□□□□□ -1.76
SCN8A-210ENST00000627665 ZIC2O95409 532 aaPredicted RBP4.07□□□□□ -1.76
SCN8A-210ENST00000627665 PLA2G4AP47712 749 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 CEBPAP49715 358 aaPredicted RBP4.07□□□□□ -1.76
SCN8A-210ENST00000627665 ST13P50502 369 aaKnown RBP4.07□□□□□ -1.76
SCN8A-210ENST00000627665 ARSDP51689 593 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 RELBQ01201 579 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 ORC1Q13415 861 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 PWP1Q13610 501 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.07□□□□□ -1.76
SCN8A-210ENST00000627665 XKR5Q6UX68 686 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 ZDHHC1Q8WTX9 485 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 GMLQ99445 158 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 TINF2Q9BSI4 451 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 TSEN34Q9BSV6 310 aaKnown RBP4.07□□□□□ -1.76
SCN8A-210ENST00000627665 C12orf49Q9H741 205 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 DDX41Q9UJV9 622 aaKnown RBP4.07□□□□□ -1.76
SCN8A-210ENST00000627665 GJA3Q9Y6H8 435 aa4.07□□□□□ -1.76
SCN8A-210ENST00000627665 KIF27Q86VH2 1401 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 USP31Q70CQ4 1352 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 GADD45BO75293 160 aaPredicted RBP4.06□□□□□ -1.76
SCN8A-210ENST00000627665 RLBP1P12271 317 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 RNF144AP50876 292 aaPredicted RBP4.06□□□□□ -1.76
SCN8A-210ENST00000627665 WDR4P57081 412 aaKnown RBP4.06□□□□□ -1.76
SCN8A-210ENST00000627665 PIP4K2BP78356 416 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 PTPN12Q05209 780 aaKnown RBP4.06□□□□□ -1.76
SCN8A-210ENST00000627665 CBLBQ13191 982 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 LDLRAD1Q5T700 205 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 LIAT1Q6ZQX7 453 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 ANKRD13AQ8IZ07 590 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 CCDC74AQ96AQ1 378 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 ACBD3Q9H3P7 528 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 ZFYVE1Q9HBF4 777 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 C11orf16Q9NQ32 467 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 TRAK1Q9UPV9 953 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 USP3Q9Y6I4 520 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 STRCQ7RTU9 1775 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 PREX1Q8TCU6 1659 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 FRMPD1Q5SYB0 1578 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 TTC37Q6PGP7 1564 aa4.06□□□□□ -1.76
SCN8A-210ENST00000627665 DENND4BO75064 1496 aaPredicted RBP4.05□□□□□ -1.76
SCN8A-210ENST00000627665 ZNF335Q9H4Z2 1342 aaPredicted RBP4.05□□□□□ -1.76
SCN8A-210ENST00000627665 OPLAHO14841 1288 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 TOM1O60784 492 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 TNFRSF21O75509 655 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 GSTT1P30711 240 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 IDH3AP50213 366 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms