RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 COL19A1Q14993 1142 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 SLFNL1Q499Z3 407 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 HELQQ8TDG4 1101 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 DNAJC25Q9H1X3 360 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 RABGAP1Q9Y3P9 1069 aa10.34□□□□□ -0.75
CDKL5-206ENST00000623610 CLK2P49760 499 aaKnown RBP10.33□□□□□ -0.76
CDKL5-206ENST00000623610 LMBRD2Q68DH5 695 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-206ENST00000623610 FBXO22Q8NEZ5 403 aa10.33□□□□□ -0.76
CDKL5-206ENST00000623610 CDHR1Q96JP9 859 aa10.33□□□□□ -0.76
CDKL5-206ENST00000623610 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
CDKL5-206ENST00000623610 RRBP1Q9P2E9 1410 aaKnown RBP10.33□□□□□ -0.76
CDKL5-206ENST00000623610 DNAJC21Q5F1R6 531 aaKnown RBP10.33□□□□□ -0.76
CDKL5-206ENST00000623610 GAS2L2Q8NHY3 880 aa10.33□□□□□ -0.76
CDKL5-206ENST00000623610 FRS2Q8WU20 508 aa10.33□□□□□ -0.76
CDKL5-206ENST00000623610 ATRIPQ8WXE1 791 aa10.33□□□□□ -0.76
CDKL5-206ENST00000623610 MRFAP1L1Q96HT8 127 aa10.33□□□□□ -0.76
CDKL5-206ENST00000623610 FAM210AQ96ND0 272 aa10.33□□□□□ -0.76
CDKL5-206ENST00000623610 DUOX2Q9NRD8 1548 aa10.32□□□□□ -0.76
CDKL5-206ENST00000623610 CLTCQ00610 1675 aaKnown RBP10.32□□□□□ -0.76
CDKL5-206ENST00000623610 ANKRD30AQ9BXX3 1397 aa10.32□□□□□ -0.76
CDKL5-206ENST00000623610 FOSL1P15407 271 aa10.32□□□□□ -0.76
CDKL5-206ENST00000623610 VAC14Q08AM6 782 aa10.32□□□□□ -0.76
CDKL5-206ENST00000623610 ALKBH2Q6NS38 261 aa10.32□□□□□ -0.76
CDKL5-206ENST00000623610 C3P01024 1663 aa10.32□□□□□ -0.76
CDKL5-206ENST00000623610 A0A1W2PRQ8 180 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 GOLGA6L6A8MZA4 724 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 K7ELQ4 463 aaPredicted RBP10.31□□□□□ -0.76
CDKL5-206ENST00000623610 RPN1P04843 607 aaKnown RBP10.31□□□□□ -0.76
CDKL5-206ENST00000623610 TMEM259Q4ZIN3 620 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 PGBD3Q8N328 593 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 NELL1Q92832 810 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 CENPOQ9BU64 300 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 GRXCR2A6NFK2 248 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 GEMIN4P57678 1058 aaKnown RBP10.31□□□□□ -0.76
CDKL5-206ENST00000623610 CCT2P78371 535 aaKnown RBP10.31□□□□□ -0.76
CDKL5-206ENST00000623610 PPP2R5AQ15172 486 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 ZCCHC8Q6NZY4 707 aaKnown RBP10.31□□□□□ -0.76
CDKL5-206ENST00000623610 CATIPQ7Z7H3 387 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 LCA5Q86VQ0 697 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 RELTQ969Z4 430 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 ANO2Q9NQ90 1003 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 ADGRL2O95490 1459 aa10.31□□□□□ -0.76
CDKL5-206ENST00000623610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.3□□□□□ -0.76
CDKL5-206ENST00000623610 TSPAN6O43657 245 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 TSPAN7P41732 249 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 ZNF132P52740 706 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 TAF11Q15544 211 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 FAM161AQ3B820 660 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 GRAMD1BQ3KR37 738 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 PLEKHG4Q58EX7 1191 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 MCF2L2Q86YR7 1114 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 TMUB1Q9BVT8 246 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 SUDS3Q9H7L9 328 aaPredicted RBP10.3□□□□□ -0.76
CDKL5-206ENST00000623610 CNTLNQ9NXG0 1405 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 PRKAB1Q9Y478 270 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 EIF2AK4Q9P2K8 1649 aaKnown RBP10.3□□□□□ -0.76
CDKL5-206ENST00000623610 ZMYM3Q14202 1370 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 PPP1R3GB7ZBB8 358 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 MYL3P08590 195 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 MAPK1P28482 360 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 NOS2P35228 1153 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 ACBD5Q5T8D3 534 aaPredicted RBP10.3□□□□□ -0.76
CDKL5-206ENST00000623610 NUTM2GQ5VZR2 741 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 HDGFL2Q7Z4V5 671 aaPredicted RBP10.3□□□□□ -0.76
CDKL5-206ENST00000623610 TMEM87BQ96K49 555 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 TTC14Q96N46 770 aa10.3□□□□□ -0.76
CDKL5-206ENST00000623610 DHX57Q6P158 1386 aaKnown RBP10.29□□□□□ -0.76
CDKL5-206ENST00000623610 ERBINQ96RT1 1412 aa10.29□□□□□ -0.76
CDKL5-206ENST00000623610 MPHOSPH10O00566 681 aaKnown RBP10.29□□□□□ -0.76
CDKL5-206ENST00000623610 MYL1P05976 194 aa10.29□□□□□ -0.76
CDKL5-206ENST00000623610 PIK3CAP42336 1068 aa10.29□□□□□ -0.76
CDKL5-206ENST00000623610 MDM2Q00987 491 aaPredicted RBP10.29□□□□□ -0.76
CDKL5-206ENST00000623610 E2F7Q96AV8 911 aa10.29□□□□□ -0.76
CDKL5-206ENST00000623610 HOMER2Q9NSB8 354 aa10.29□□□□□ -0.76
CDKL5-206ENST00000623610 MROH2AA6NES4 1674 aa10.29□□□□□ -0.76
CDKL5-206ENST00000623610 WASHC2CQ9Y4E1 1318 aa10.29□□□□□ -0.76
CDKL5-206ENST00000623610 RNF17Q9BXT8 1623 aaKnown RBP10.29□□□□□ -0.76
CDKL5-206ENST00000623610 C11orf95C9JLR9 678 aaPredicted RBP10.28□□□□□ -0.76
CDKL5-206ENST00000623610 PITPNM1O00562 1244 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 LILRB3O75022 631 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 HSP90AB1P08238 724 aaKnown RBP10.28□□□□□ -0.76
CDKL5-206ENST00000623610 ZNF131P52739 623 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 ARID5AQ03989 594 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 NFX1Q12986 1120 aaKnown RBP10.28□□□□□ -0.76
CDKL5-206ENST00000623610 EAPPQ56P03 285 aaPredicted RBP10.28□□□□□ -0.76
CDKL5-206ENST00000623610 EP400NLQ6ZTU2 488 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 EFCAB3Q8N7B9 438 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 ALG2Q9H553 416 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 TAGLN3Q9UI15 199 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 PPP2R3BQ9Y5P8 575 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 MROH1Q8NDA8 1641 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
CDKL5-206ENST00000623610 CTHP32929 405 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 SEC13P55735 322 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 DNTTIP2Q5QJE6 756 aaKnown RBP10.28□□□□□ -0.76
CDKL5-206ENST00000623610 SOGA3Q5TF21 947 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 ERAP2Q6P179 960 aa10.28□□□□□ -0.76
CDKL5-206ENST00000623610 CERKQ8TCT0 537 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms