RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 C15orf52Q6ZUT6 534 aaKnown RBP16.77■□□□□ 0.27
GRIA3-208ENST00000620581 SRP68Q9UHB9 627 aaKnown RBP16.77■□□□□ 0.27
GRIA3-208ENST00000620581 PRR5LQ6MZQ0 368 aa16.76■□□□□ 0.27
GRIA3-208ENST00000620581 NBPF7P0C2Y1 421 aaPredicted RBP16.76■□□□□ 0.27
GRIA3-208ENST00000620581 CCDC152Q4G0S7 254 aa16.76■□□□□ 0.27
GRIA3-208ENST00000620581 SOCS7O14512 581 aa16.75■□□□□ 0.27
GRIA3-208ENST00000620581 IRS4O14654 1257 aaPredicted RBP16.75■□□□□ 0.27
GRIA3-208ENST00000620581 PDE6BP35913 854 aa16.75■□□□□ 0.27
GRIA3-208ENST00000620581 CD2APQ9Y5K6 639 aa16.75■□□□□ 0.27
GRIA3-208ENST00000620581 DICER1Q9UPY3 1922 aaKnown RBP16.75■□□□□ 0.27
GRIA3-208ENST00000620581 SERPINB2P05120 415 aa16.75■□□□□ 0.27
GRIA3-208ENST00000620581 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
GRIA3-208ENST00000620581 SIRT2Q8IXJ6 389 aa16.75■□□□□ 0.27
GRIA3-208ENST00000620581 TTLL11Q8NHH1 800 aa16.75■□□□□ 0.27
GRIA3-208ENST00000620581 PARP3Q9Y6F1 533 aa16.75■□□□□ 0.27
GRIA3-208ENST00000620581 TGFB2P61812 414 aa16.74■□□□□ 0.27
GRIA3-208ENST00000620581 TMED8Q6PL24 325 aaPredicted RBP16.74■□□□□ 0.27
GRIA3-208ENST00000620581 CNBD1Q8NA66 436 aa16.74■□□□□ 0.27
GRIA3-208ENST00000620581 VPS33BQ9H267 617 aa16.74■□□□□ 0.27
GRIA3-208ENST00000620581 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
GRIA3-208ENST00000620581 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
GRIA3-208ENST00000620581 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
GRIA3-208ENST00000620581 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
GRIA3-208ENST00000620581 PDS5AQ29RF7 1337 aaKnown RBP16.74■□□□□ 0.27
GRIA3-208ENST00000620581 MYH13Q9UKX3 1938 aa16.73■□□□□ 0.27
GRIA3-208ENST00000620581 CC2D2BQ6DHV5 1058 aa16.73■□□□□ 0.27
GRIA3-208ENST00000620581 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
GRIA3-208ENST00000620581 CDC5LQ99459 802 aaKnown RBP16.73■□□□□ 0.27
GRIA3-208ENST00000620581 BICC1Q9H694 974 aaKnown RBP16.73■□□□□ 0.27
GRIA3-208ENST00000620581 MROH5Q6ZUA9 1318 aa16.72■□□□□ 0.27
GRIA3-208ENST00000620581 UBE3BQ7Z3V4 1068 aa16.72■□□□□ 0.27
GRIA3-208ENST00000620581 ZNF512BQ96KM6 892 aaPredicted RBP16.72■□□□□ 0.27
GRIA3-208ENST00000620581 RFX7Q2KHR2 1363 aa16.71■□□□□ 0.27
GRIA3-208ENST00000620581 NPR1P16066 1061 aa16.71■□□□□ 0.27
GRIA3-208ENST00000620581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.71■□□□□ 0.27
GRIA3-208ENST00000620581 COL4A1P02462 1669 aa16.71■□□□□ 0.27
GRIA3-208ENST00000620581 KCNQ4P56696 695 aa16.71■□□□□ 0.27
GRIA3-208ENST00000620581 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
GRIA3-208ENST00000620581 ATP5J2-PTCD1G3V325 749 aa16.71■□□□□ 0.26
GRIA3-208ENST00000620581 SALL3Q9BXA9 1300 aa16.7■□□□□ 0.26
GRIA3-208ENST00000620581 IL15P40933 162 aaPredicted RBP16.7■□□□□ 0.26
GRIA3-208ENST00000620581 ERFEQ4G0M1 354 aa16.7■□□□□ 0.26
GRIA3-208ENST00000620581 NLRP3Q96P20 1036 aa16.7■□□□□ 0.26
GRIA3-208ENST00000620581 PODXL2Q9NZ53 605 aa16.7■□□□□ 0.26
GRIA3-208ENST00000620581 PTGER2P43116 358 aa16.7■□□□□ 0.26
GRIA3-208ENST00000620581 NUCB1Q02818 461 aa16.7■□□□□ 0.26
GRIA3-208ENST00000620581 PTPN12Q05209 780 aaKnown RBP16.7■□□□□ 0.26
GRIA3-208ENST00000620581 OSBPL3Q9H4L5 887 aa16.7■□□□□ 0.26
GRIA3-208ENST00000620581 BSDC1Q9NW68 430 aaPredicted RBP16.7■□□□□ 0.26
GRIA3-208ENST00000620581 BBOX1O75936 387 aa16.69■□□□□ 0.26
GRIA3-208ENST00000620581 RBM17Q96I25 401 aaKnown RBP16.69■□□□□ 0.26
GRIA3-208ENST00000620581 ANKRD18BA2A2Z9 1011 aa16.69■□□□□ 0.26
GRIA3-208ENST00000620581 EPHA10Q5JZY3 1008 aa16.69■□□□□ 0.26
GRIA3-208ENST00000620581 MYH7P12883 1935 aa16.69■□□□□ 0.26
GRIA3-208ENST00000620581 POLD1P28340 1107 aa16.68■□□□□ 0.26
GRIA3-208ENST00000620581 GRAPQ13588 217 aa16.68■□□□□ 0.26
GRIA3-208ENST00000620581 GRAPLQ8TC17 118 aaPredicted RBP16.68■□□□□ 0.26
GRIA3-208ENST00000620581 LTBP3Q9NS15 1303 aa16.68■□□□□ 0.26
GRIA3-208ENST00000620581 PHF14O94880 888 aa16.68■□□□□ 0.26
GRIA3-208ENST00000620581 MMP10P09238 476 aa16.68■□□□□ 0.26
GRIA3-208ENST00000620581 SOGA3Q5TF21 947 aa16.68■□□□□ 0.26
GRIA3-208ENST00000620581 VGLL2Q8N8G2 317 aa16.68■□□□□ 0.26
GRIA3-208ENST00000620581 MASTLQ96GX5 879 aa16.68■□□□□ 0.26
GRIA3-208ENST00000620581 IRS2Q9Y4H2 1338 aa16.67■□□□□ 0.26
GRIA3-208ENST00000620581 EYA2O00167 538 aa16.67■□□□□ 0.26
GRIA3-208ENST00000620581 ALDH1B1P30837 517 aa16.67■□□□□ 0.26
GRIA3-208ENST00000620581 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
GRIA3-208ENST00000620581 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
GRIA3-208ENST00000620581 AK9Q5TCS8 1911 aa16.67■□□□□ 0.26
GRIA3-208ENST00000620581 ANKRD2Q9GZV1 360 aa16.67■□□□□ 0.26
GRIA3-208ENST00000620581 RIPOR2Q9Y4F9 1068 aa16.67■□□□□ 0.26
GRIA3-208ENST00000620581 SRGNP10124 158 aa16.66■□□□□ 0.26
GRIA3-208ENST00000620581 RTFDC1Q9BY42 306 aaPredicted RBP16.66■□□□□ 0.26
GRIA3-208ENST00000620581 AKAP11Q9UKA4 1901 aa16.66■□□□□ 0.26
GRIA3-208ENST00000620581 SLX4Q8IY92 1834 aa16.66■□□□□ 0.26
GRIA3-208ENST00000620581 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
GRIA3-208ENST00000620581 GPTP24298 496 aa16.65■□□□□ 0.26
GRIA3-208ENST00000620581 LMBR1LQ6UX01 489 aa16.65■□□□□ 0.26
GRIA3-208ENST00000620581 FAM89AQ96GI7 184 aa16.65■□□□□ 0.26
GRIA3-208ENST00000620581 ATG9AQ7Z3C6 839 aa16.65■□□□□ 0.26
GRIA3-208ENST00000620581 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
GRIA3-208ENST00000620581 SP8Q8IXZ3 490 aa16.65■□□□□ 0.26
GRIA3-208ENST00000620581 CNKSR1Q969H4 720 aa16.65■□□□□ 0.26
GRIA3-208ENST00000620581 TTC41PQ6P2S7 1318 aa16.64■□□□□ 0.26
GRIA3-208ENST00000620581 EP400Q96L91 3159 aa16.64■□□□□ 0.26
GRIA3-208ENST00000620581 FGFR2P21802 821 aa16.64■□□□□ 0.25
GRIA3-208ENST00000620581 CCDC57Q2TAC2 916 aa16.64■□□□□ 0.25
GRIA3-208ENST00000620581 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
GRIA3-208ENST00000620581 AKAP2Q9Y2D5 859 aa16.64■□□□□ 0.25
GRIA3-208ENST00000620581 TAF1P21675 1872 aa16.63■□□□□ 0.25
GRIA3-208ENST00000620581 MED23Q9ULK4 1368 aa16.63■□□□□ 0.25
GRIA3-208ENST00000620581 ITGA6P23229 1130 aa16.62■□□□□ 0.25
GRIA3-208ENST00000620581 MMP14P50281 582 aa16.62■□□□□ 0.25
GRIA3-208ENST00000620581 LEMD3Q9Y2U8 911 aa16.62■□□□□ 0.25
GRIA3-208ENST00000620581 UBE4AQ14139 1066 aa16.62■□□□□ 0.25
GRIA3-208ENST00000620581 SPON1Q9HCB6 807 aa16.62■□□□□ 0.25
GRIA3-208ENST00000620581 SEMA3EO15041 775 aa16.62■□□□□ 0.25
GRIA3-208ENST00000620581 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
GRIA3-208ENST00000620581 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
GRIA3-208ENST00000620581 GREM2Q9H772 168 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms