RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 TRIM28Q13263 835 aaKnown RBP21.26■□□□□ 0.99
CNOT3-209ENST00000617930 TNNI3KQ59H18 835 aa21.26■□□□□ 0.99
CNOT3-209ENST00000617930 BOLA2Q9H3K6 86 aa21.26■□□□□ 0.99
CNOT3-209ENST00000617930 LRRC4BQ9NT99 713 aa21.26■□□□□ 0.99
CNOT3-209ENST00000617930 FPGT-TNNI3KV9GXZ4 949 aa21.26■□□□□ 0.99
CNOT3-209ENST00000617930 NLRP10Q86W26 655 aa21.25■□□□□ 0.99
CNOT3-209ENST00000617930 ZNF594Q96JF6 807 aaPredicted RBP21.25■□□□□ 0.99
CNOT3-209ENST00000617930 BCL11BQ9C0K0 894 aaPredicted RBP21.25■□□□□ 0.99
CNOT3-209ENST00000617930 CCNL1Q9UK58 526 aaPredicted RBP21.24■□□□□ 0.99
CNOT3-209ENST00000617930 ERVV-1B6SEH8 477 aa21.24■□□□□ 0.99
CNOT3-209ENST00000617930 HSPA4P34932 840 aa21.24■□□□□ 0.99
CNOT3-209ENST00000617930 FBXO41Q8TF61 875 aa21.24■□□□□ 0.99
CNOT3-209ENST00000617930 EDC3Q96F86 508 aaKnown RBP21.24■□□□□ 0.99
CNOT3-209ENST00000617930 FAM89AQ96GI7 184 aa21.24■□□□□ 0.99
CNOT3-209ENST00000617930 GPATCH3Q96I76 525 aa21.24■□□□□ 0.99
CNOT3-209ENST00000617930 CHMP3Q9Y3E7 222 aa21.24■□□□□ 0.99
CNOT3-209ENST00000617930 CNTNAP4Q9C0A0 1308 aa21.24■□□□□ 0.99
CNOT3-209ENST00000617930 TRIM37O94972 964 aa21.23■□□□□ 0.99
CNOT3-209ENST00000617930 LRRC24Q50LG9 513 aa21.23■□□□□ 0.99
CNOT3-209ENST00000617930 POTEAQ6S8J7 498 aa21.23■□□□□ 0.99
CNOT3-209ENST00000617930 EVI5LQ96CN4 794 aa21.23■□□□□ 0.99
CNOT3-209ENST00000617930 ZNF34Q8IZ26 560 aa21.22■□□□□ 0.99
CNOT3-209ENST00000617930 NDUFB9Q9Y6M9 179 aa21.22■□□□□ 0.99
CNOT3-209ENST00000617930 AK9Q5TCS8 1911 aa21.22■□□□□ 0.99
CNOT3-209ENST00000617930 DBNDD2Q9BQY9 259 aa21.22■□□□□ 0.99
CNOT3-209ENST00000617930 PUS3Q9BZE2 481 aaKnown RBP21.22■□□□□ 0.99
CNOT3-209ENST00000617930 RAD50Q92878 1312 aa21.22■□□□□ 0.99
CNOT3-209ENST00000617930 C4BP0C0L5 1744 aa21.22■□□□□ 0.99
CNOT3-209ENST00000617930 NEK4P51957 841 aa21.21■□□□□ 0.99
CNOT3-209ENST00000617930 PTH1RQ03431 593 aa21.21■□□□□ 0.99
CNOT3-209ENST00000617930 FAM196AQ6ZSG2 479 aa21.21■□□□□ 0.99
CNOT3-209ENST00000617930 FAM227BQ96M60 508 aa21.21■□□□□ 0.99
CNOT3-209ENST00000617930 ANAPC15P60006 121 aa21.21■□□□□ 0.99
CNOT3-209ENST00000617930 RASEFQ8IZ41 740 aa21.21■□□□□ 0.99
CNOT3-209ENST00000617930 EPB41L2O43491 1005 aaKnown RBP21.2■□□□□ 0.98
CNOT3-209ENST00000617930 PCCAP05165 728 aaPredicted RBP21.2■□□□□ 0.98
CNOT3-209ENST00000617930 SCN7AQ01118 1682 aa21.19■□□□□ 0.98
CNOT3-209ENST00000617930 BCL2L12Q9HB09 334 aa21.19■□□□□ 0.98
CNOT3-209ENST00000617930 ST18O60284 1047 aa21.19■□□□□ 0.98
CNOT3-209ENST00000617930 CHGBP05060 677 aa21.19■□□□□ 0.98
CNOT3-209ENST00000617930 ATP5JP18859 108 aa21.19■□□□□ 0.98
CNOT3-209ENST00000617930 MCM4P33991 863 aa21.19■□□□□ 0.98
CNOT3-209ENST00000617930 RAB3GAP1Q15042 981 aa21.19■□□□□ 0.98
CNOT3-209ENST00000617930 ZBTB38Q8NAP3 1195 aaPredicted RBP21.19■□□□□ 0.98
CNOT3-209ENST00000617930 UPF3BQ9BZI7 483 aaKnown RBP21.19■□□□□ 0.98
CNOT3-209ENST00000617930 DIAPH3Q9NSV4 1193 aa21.19■□□□□ 0.98
CNOT3-209ENST00000617930 NMIQ13287 307 aaPredicted RBP21.18■□□□□ 0.98
CNOT3-209ENST00000617930 L1TD1Q5T7N2 865 aaKnown RBP21.18■□□□□ 0.98
CNOT3-209ENST00000617930 ZGPATQ8N5A5 531 aaKnown RBP21.18■□□□□ 0.98
CNOT3-209ENST00000617930 TNPO1Q92973 898 aaKnown RBP21.18■□□□□ 0.98
CNOT3-209ENST00000617930 CCDC85AQ96PX6 553 aaPredicted RBP21.18■□□□□ 0.98
CNOT3-209ENST00000617930 CIZ1Q9ULV3 898 aaPredicted RBP21.18■□□□□ 0.98
CNOT3-209ENST00000617930 C4AP0C0L4 1744 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 HSP90AA1P07900 732 aaKnown RBP21.17■□□□□ 0.98
CNOT3-209ENST00000617930 TIMM10P62072 90 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 RC3H1Q5TC82 1133 aaKnown RBP21.17■□□□□ 0.98
CNOT3-209ENST00000617930 SUSD4Q5VX71 490 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 PROM2Q8N271 834 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 SNX14Q9Y5W7 946 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 A0A0D9SFI3 127 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 EYA2O00167 538 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 CSF1RP07333 972 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 MCCP23508 829 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 RXRBP28702 533 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 HSP90AB3PQ58FF7 597 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 PLA2G12BQ9BX93 195 aa21.17■□□□□ 0.98
CNOT3-209ENST00000617930 SRP68Q9UHB9 627 aaKnown RBP21.17■□□□□ 0.98
CNOT3-209ENST00000617930 GNPATO15228 680 aa21.16■□□□□ 0.98
CNOT3-209ENST00000617930 RPS6KA4O75676 772 aa21.16■□□□□ 0.98
CNOT3-209ENST00000617930 SNRKQ9NRH2 765 aa21.16■□□□□ 0.98
CNOT3-209ENST00000617930 IL15P40933 162 aaPredicted RBP21.15■□□□□ 0.98
CNOT3-209ENST00000617930 PKP1Q13835 747 aa21.15■□□□□ 0.98
CNOT3-209ENST00000617930 TMX3Q96JJ7 454 aa21.15■□□□□ 0.98
CNOT3-209ENST00000617930 DDX60Q8IY21 1712 aaKnown RBP21.15■□□□□ 0.98
CNOT3-209ENST00000617930 CDHR2Q9BYE9 1310 aa21.14■□□□□ 0.98
CNOT3-209ENST00000617930 FAM177BA6PVY3 158 aa21.14■□□□□ 0.98
CNOT3-209ENST00000617930 SSFA2P28290 1259 aa21.14■□□□□ 0.98
CNOT3-209ENST00000617930 MYH3P11055 1940 aa21.14■□□□□ 0.97
CNOT3-209ENST00000617930 UBR3Q6ZT12 1888 aa21.14■□□□□ 0.97
CNOT3-209ENST00000617930 FSD1Q9BTV5 496 aa21.14■□□□□ 0.97
CNOT3-209ENST00000617930 TRMT112Q9UI30 125 aaKnown RBP21.14■□□□□ 0.97
CNOT3-209ENST00000617930 CIAO1O76071 339 aa21.13■□□□□ 0.97
CNOT3-209ENST00000617930 COL9A3Q14050 684 aaPredicted RBP21.13■□□□□ 0.97
CNOT3-209ENST00000617930 ZNF589Q86UQ0 364 aaPredicted RBP21.13■□□□□ 0.97
CNOT3-209ENST00000617930 USPL1Q5W0Q7 1092 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 RUFY2Q8WXA3 655 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 HAUS7Q99871 368 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 GPR108Q9NPR9 543 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 COL4A1P02462 1669 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 NTSR2O95665 410 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 NECTIN1Q15223 517 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 ADCK5Q3MIX3 580 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 KIAA1211Q6ZU35 1233 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 TTLL11Q8NHH1 800 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 ARHGEF1Q92888 912 aaKnown RBP21.12■□□□□ 0.97
CNOT3-209ENST00000617930 KCNB2Q92953 911 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 NEUROD6Q96NK8 337 aa21.12■□□□□ 0.97
CNOT3-209ENST00000617930 NIP7Q9Y221 180 aaKnown RBP eCLIP21.12■□□□□ 0.97
CNOT3-209ENST00000617930 IRS4O14654 1257 aaPredicted RBP21.11■□□□□ 0.97
CNOT3-209ENST00000617930 CPA1P15085 419 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms