RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 SMC2O95347 1197 aa16.27■□□□□ 0.19
HPS1-215ENST00000613394 CHRNA2Q15822 529 aa16.27■□□□□ 0.19
HPS1-215ENST00000613394 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.19
HPS1-215ENST00000613394 MYRIPQ8NFW9 859 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 PRIMPOLQ96LW4 560 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 DBNDD2Q9BQY9 259 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 NCOA5Q9HCD5 579 aaKnown RBP16.26■□□□□ 0.19
HPS1-215ENST00000613394 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 OVOS2A0A0J9YW53 1432 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 OVOS2Q6IE36 1432 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 RIOK3O14730 519 aaKnown RBP16.26■□□□□ 0.19
HPS1-215ENST00000613394 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
HPS1-215ENST00000613394 ANKRD13DQ6ZTN6 518 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 CBX8Q9HC52 389 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 SASH1O94885 1247 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 SLFNL1Q499Z3 407 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 CCDC112Q8NEF3 446 aa16.26■□□□□ 0.19
HPS1-215ENST00000613394 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
HPS1-215ENST00000613394 APOBRQ0VD83 1088 aa16.25■□□□□ 0.19
HPS1-215ENST00000613394 STK38Q15208 465 aa16.25■□□□□ 0.19
HPS1-215ENST00000613394 CFAP45Q9UL16 551 aa16.25■□□□□ 0.19
HPS1-215ENST00000613394 NR1I2O75469 434 aa16.25■□□□□ 0.19
HPS1-215ENST00000613394 KRT32Q14532 448 aa16.25■□□□□ 0.19
HPS1-215ENST00000613394 HSP90AB3PQ58FF7 597 aa16.25■□□□□ 0.19
HPS1-215ENST00000613394 LMBR1LQ6UX01 489 aa16.25■□□□□ 0.19
HPS1-215ENST00000613394 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
HPS1-215ENST00000613394 LEO1Q8WVC0 666 aaPredicted RBP16.25■□□□□ 0.19
HPS1-215ENST00000613394 DDX19AQ9NUU7 478 aaKnown RBP16.25■□□□□ 0.19
HPS1-215ENST00000613394 NRDCO43847 1150 aa16.24■□□□□ 0.19
HPS1-215ENST00000613394 TIMM10P62072 90 aa16.24■□□□□ 0.19
HPS1-215ENST00000613394 CABLES1Q8TDN4 633 aa16.24■□□□□ 0.19
HPS1-215ENST00000613394 ZBTB3Q9H5J0 574 aa16.24■□□□□ 0.19
HPS1-215ENST00000613394 TERF1P54274 439 aa16.24■□□□□ 0.19
HPS1-215ENST00000613394 COL9A3Q14050 684 aaPredicted RBP16.24■□□□□ 0.19
HPS1-215ENST00000613394 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
HPS1-215ENST00000613394 CABP4P57796 275 aa16.24■□□□□ 0.19
HPS1-215ENST00000613394 ZNF771Q7L3S4 317 aaPredicted RBP16.24■□□□□ 0.19
HPS1-215ENST00000613394 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
HPS1-215ENST00000613394 CLTCQ00610 1675 aaKnown RBP16.23■□□□□ 0.19
HPS1-215ENST00000613394 HOMER1Q86YM7 354 aa16.23■□□□□ 0.19
HPS1-215ENST00000613394 FSIP1Q8NA03 581 aa16.23■□□□□ 0.19
HPS1-215ENST00000613394 CEP170BQ9Y4F5 1589 aaPredicted RBP16.23■□□□□ 0.19
HPS1-215ENST00000613394 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
HPS1-215ENST00000613394 OTUD7BQ6GQQ9 843 aa16.23■□□□□ 0.19
HPS1-215ENST00000613394 SYNE3Q6ZMZ3 975 aa16.23■□□□□ 0.19
HPS1-215ENST00000613394 ANKLE2Q86XL3 938 aa16.23■□□□□ 0.19
HPS1-215ENST00000613394 DDX21Q9NR30 783 aaKnown RBP eCLIP16.23■□□□□ 0.19
HPS1-215ENST00000613394 NECTIN1Q15223 517 aa16.23■□□□□ 0.19
HPS1-215ENST00000613394 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
HPS1-215ENST00000613394 ATP2B1P20020 1258 aa16.22■□□□□ 0.19
HPS1-215ENST00000613394 MAP4K1Q92918 833 aa16.22■□□□□ 0.19
HPS1-215ENST00000613394 DLC1Q96QB1 1528 aa16.22■□□□□ 0.19
HPS1-215ENST00000613394 RALYLQ86SE5 291 aaKnown RBP16.22■□□□□ 0.19
HPS1-215ENST00000613394 BCL2L12Q9HB09 334 aa16.22■□□□□ 0.19
HPS1-215ENST00000613394 TM6SF1Q9BZW5 370 aa16.21■□□□□ 0.19
HPS1-215ENST00000613394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.21■□□□□ 0.19
HPS1-215ENST00000613394 USP31Q70CQ4 1352 aa16.21■□□□□ 0.19
HPS1-215ENST00000613394 SYTL4Q96C24 671 aaPredicted RBP16.21■□□□□ 0.19
HPS1-215ENST00000613394 BABAM1Q9NWV8 329 aa16.21■□□□□ 0.19
HPS1-215ENST00000613394 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
HPS1-215ENST00000613394 DLG5Q8TDM6 1919 aa16.21■□□□□ 0.19
HPS1-215ENST00000613394 EPHA10Q5JZY3 1008 aa16.21■□□□□ 0.19
HPS1-215ENST00000613394 ZNF496Q96IT1 587 aaPredicted RBP16.21■□□□□ 0.19
HPS1-215ENST00000613394 U3KPZ7 1027 aaPredicted RBP16.21■□□□□ 0.19
HPS1-215ENST00000613394 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
HPS1-215ENST00000613394 U2AF2P26368 475 aaKnown RBP eCLIP16.2■□□□□ 0.18
HPS1-215ENST00000613394 DDX17Q92841 729 aaKnown RBP16.2■□□□□ 0.18
HPS1-215ENST00000613394 ZNF396Q96N95 335 aaPredicted RBP16.2■□□□□ 0.18
HPS1-215ENST00000613394 MRVI1Q9Y6F6 885 aa16.2■□□□□ 0.18
HPS1-215ENST00000613394 ZNF790Q6PG37 636 aa16.2■□□□□ 0.18
HPS1-215ENST00000613394 FAM177A1Q8N128 213 aaPredicted RBP16.2■□□□□ 0.18
HPS1-215ENST00000613394 MCMDC2Q4G0Z9 681 aa16.2■□□□□ 0.18
HPS1-215ENST00000613394 KRT28Q7Z3Y7 464 aa16.2■□□□□ 0.18
HPS1-215ENST00000613394 GCKRQ14397 625 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 CCDC94Q9BW85 323 aaPredicted RBP16.19■□□□□ 0.18
HPS1-215ENST00000613394 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 ADCY9O60503 1353 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 KDRP35968 1356 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 HOXB7P09629 217 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 TPM4P67936 248 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 CREBRFQ8IUR6 639 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 ZNF594Q96JF6 807 aaPredicted RBP16.19■□□□□ 0.18
HPS1-215ENST00000613394 DBNLQ9UJU6 430 aaKnown RBP16.19■□□□□ 0.18
HPS1-215ENST00000613394 PTPDC1A2A3K4 754 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 AP5Z1O43299 807 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 TNNI3KQ59H18 835 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 CEP57L1Q8IYX8 460 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 FPGT-TNNI3KV9GXZ4 949 aa16.19■□□□□ 0.18
HPS1-215ENST00000613394 TMEM87AQ8NBN3 555 aa16.18■□□□□ 0.18
HPS1-215ENST00000613394 AOPEPQ8N6M6 819 aa16.18■□□□□ 0.18
HPS1-215ENST00000613394 REREQ9P2R6 1566 aa16.18■□□□□ 0.18
HPS1-215ENST00000613394 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
HPS1-215ENST00000613394 PLEKHG1Q9ULL1 1385 aa16.18■□□□□ 0.18
HPS1-215ENST00000613394 TAF5LO75529 589 aa16.18■□□□□ 0.18
HPS1-215ENST00000613394 NFXL1Q6ZNB6 911 aa16.18■□□□□ 0.18
HPS1-215ENST00000613394 CCDC144CPQ8IYA2 1237 aa16.18■□□□□ 0.18
HPS1-215ENST00000613394 KIAA1524Q8TCG1 905 aa16.18■□□□□ 0.18
HPS1-215ENST00000613394 A0A1B0GVL5 298 aa16.17■□□□□ 0.18
HPS1-215ENST00000613394 NEURL1BA8MQ27 555 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms