RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 SSH3Q8TE77 659 aa12.76□□□□□ -0.37
PCDHGC3-202ENST00000611950 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
PCDHGC3-202ENST00000611950 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
PCDHGC3-202ENST00000611950 OFD1O75665 1012 aa12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 ZC3H6P61129 1189 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 USP48Q86UV5 1035 aa12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 OTUD6BQ8N6M0 293 aa12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 KDM3BQ7LBC6 1761 aa12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 AIMP1Q12904 312 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 CT47A1Q5JQC4 288 aaPredicted RBP12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 TCEANC2Q96MN5 208 aa12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 TNS1Q9HBL0 1735 aaKnown RBP12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 LARGE1O95461 756 aa12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 COL9A3Q14050 684 aaPredicted RBP12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 IFNLR1Q8IU57 520 aaPredicted RBP12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 RAI14Q9P0K7 980 aa12.75□□□□□ -0.37
PCDHGC3-202ENST00000611950 POLA2Q14181 598 aa12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 ZNF530Q6P9A1 599 aaPredicted RBP12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 CEP83Q9Y592 693 aa12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 APBA3O96018 575 aa12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 CASTP20810 708 aaKnown RBP12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 AK2P54819 239 aa12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 BEND3Q5T5X7 828 aa12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 SIL1Q9H173 461 aa12.74□□□□□ -0.37
PCDHGC3-202ENST00000611950 CRYBG1Q9Y4K1 1723 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 JARID2Q92833 1246 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 C17orf53Q8N3J3 647 aaPredicted RBP12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 KCNH5Q8NCM2 988 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 PI4K2BQ8TCG2 481 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 SNX14Q9Y5W7 946 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 LMO7Q8WWI1 1683 aa12.73□□□□□ -0.37
PCDHGC3-202ENST00000611950 BTBD11A6QL63 1104 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 EVA1CP58658 441 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 TEFQ10587 303 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 ADCK5Q3MIX3 580 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 ADCY9O60503 1353 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 PHRF1Q9P1Y6 1649 aaKnown RBP12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 HOXB7P09629 217 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 PTH1RQ03431 593 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 CUL4AQ13619 759 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 NECAB1Q8N987 351 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 KLHDC4Q8TBB5 520 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 EFCC1Q9HA90 598 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 USP25Q9UHP3 1055 aa12.72□□□□□ -0.37
PCDHGC3-202ENST00000611950 VPS37CA5D8V6 355 aaPredicted RBP12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 GCP02774 474 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 FERMT3Q86UX7 667 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 BORCS6Q96GS4 357 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 TSPY26PQ9H489 355 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 C9orf78Q9NZ63 289 aaPredicted RBP12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 AOX1Q06278 1338 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 DYNC1I1O14576 645 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 HCLS1P14317 486 aaPredicted RBP12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 HSPA4P34932 840 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 FAM173BQ6P4H8 233 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 RUFY3Q7L099 469 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 CAMKK2Q96RR4 588 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.37
PCDHGC3-202ENST00000611950 DISP2A7MBM2 1401 aa12.71□□□□□ -0.38
PCDHGC3-202ENST00000611950 SGSM2O43147 1006 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 CAPN2P17655 700 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 PLEKHO1Q53GL0 409 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 JAKMIP1Q96N16 626 aaKnown RBP12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 CCDC8Q9H0W5 538 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 RNMTO43148 476 aaKnown RBP12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 MBD3O95983 291 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 CNTROBQ8N137 903 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 KIF1BPQ96EK5 621 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 RAB11FIP3O75154 756 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 ARID4AP29374 1257 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 MCM2P49736 904 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 ZBTB12Q9Y330 459 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-202ENST00000611950 TULP2O00295 520 aa12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 SYT1P21579 422 aa12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 PDLIM2Q96JY6 352 aa12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 NOL7Q9UMY1 257 aaKnown RBP12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 SMC3Q9UQE7 1217 aa12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 RAD50Q92878 1312 aa12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
PCDHGC3-202ENST00000611950 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms