RNA–Protein interactions for RNA: ENST00000608272.1

LINC00963-210, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 612 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-210ENST00000608272 ZNF408Q9H9D4 720 aa17.22■□□□□ 0.35
LINC00963-210ENST00000608272 CNOT7Q9UIV1 285 aaKnown RBP17.22■□□□□ 0.35
LINC00963-210ENST00000608272 MCM10Q7L590 875 aa17.21■□□□□ 0.35
LINC00963-210ENST00000608272 GBA2Q9HCG7 927 aaPredicted RBP17.21■□□□□ 0.35
LINC00963-210ENST00000608272 AKAP11Q9UKA4 1901 aa17.21■□□□□ 0.35
LINC00963-210ENST00000608272 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
LINC00963-210ENST00000608272 ABCC4O15439 1325 aa17.2■□□□□ 0.34
LINC00963-210ENST00000608272 NOM1Q5C9Z4 860 aaKnown RBP17.19■□□□□ 0.34
LINC00963-210ENST00000608272 TRPM4Q8TD43 1214 aa17.19■□□□□ 0.34
LINC00963-210ENST00000608272 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
LINC00963-210ENST00000608272 RNF186Q9NXI6 227 aa17.19■□□□□ 0.34
LINC00963-210ENST00000608272 KDM3BQ7LBC6 1761 aa17.18■□□□□ 0.34
LINC00963-210ENST00000608272 SLC10A3P09131 477 aa17.18■□□□□ 0.34
LINC00963-210ENST00000608272 FKBP1BP68106 108 aa17.18■□□□□ 0.34
LINC00963-210ENST00000608272 KIF23Q02241 960 aaPredicted RBP17.18■□□□□ 0.34
LINC00963-210ENST00000608272 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
LINC00963-210ENST00000608272 KRT26Q7Z3Y9 468 aa17.18■□□□□ 0.34
LINC00963-210ENST00000608272 USP48Q86UV5 1035 aa17.18■□□□□ 0.34
LINC00963-210ENST00000608272 MICALL2Q8IY33 904 aa17.18■□□□□ 0.34
LINC00963-210ENST00000608272 TNRC18O15417 2968 aaPredicted RBP17.18■□□□□ 0.34
LINC00963-210ENST00000608272 GPTP24298 496 aa17.17■□□□□ 0.34
LINC00963-210ENST00000608272 ZNF157P51786 506 aaPredicted RBP17.17■□□□□ 0.34
LINC00963-210ENST00000608272 SOX10P56693 466 aa17.17■□□□□ 0.34
LINC00963-210ENST00000608272 TTLL7Q6ZT98 887 aa17.17■□□□□ 0.34
LINC00963-210ENST00000608272 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
LINC00963-210ENST00000608272 DCPSQ96C86 337 aaKnown RBP17.17■□□□□ 0.34
LINC00963-210ENST00000608272 ZIC5Q96T25 663 aa17.17■□□□□ 0.34
LINC00963-210ENST00000608272 RAD17O75943 681 aa17.16■□□□□ 0.34
LINC00963-210ENST00000608272 NEFMP07197 916 aa17.16■□□□□ 0.34
LINC00963-210ENST00000608272 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
LINC00963-210ENST00000608272 EIF4A1P60842 406 aaKnown RBP17.16■□□□□ 0.34
LINC00963-210ENST00000608272 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC00963-210ENST00000608272 GRAPQ13588 217 aa17.16■□□□□ 0.34
LINC00963-210ENST00000608272 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
LINC00963-210ENST00000608272 GRAPLQ8TC17 118 aaPredicted RBP17.16■□□□□ 0.34
LINC00963-210ENST00000608272 ZBTB3Q9H5J0 574 aa17.16■□□□□ 0.34
LINC00963-210ENST00000608272 RRP7AQ9Y3A4 280 aaKnown RBP17.16■□□□□ 0.34
LINC00963-210ENST00000608272 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
LINC00963-210ENST00000608272 TRPA1O75762 1119 aa17.15■□□□□ 0.34
LINC00963-210ENST00000608272 C3orf67Q6ZVT6 689 aa17.15■□□□□ 0.34
LINC00963-210ENST00000608272 NGEFQ8N5V2 710 aa17.15■□□□□ 0.34
LINC00963-210ENST00000608272 LRRC37AA6NMS7 1700 aa17.15■□□□□ 0.34
LINC00963-210ENST00000608272 ZNF609O15014 1411 aa17.14■□□□□ 0.33
LINC00963-210ENST00000608272 YDJCA8MPS7 323 aa17.14■□□□□ 0.33
LINC00963-210ENST00000608272 CSRNP1Q96S65 589 aa17.14■□□□□ 0.33
LINC00963-210ENST00000608272 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
LINC00963-210ENST00000608272 DCTN1Q14203 1278 aa17.13■□□□□ 0.33
LINC00963-210ENST00000608272 SULF1Q8IWU6 871 aa17.13■□□□□ 0.33
LINC00963-210ENST00000608272 HPS5Q9UPZ3 1129 aa17.13■□□□□ 0.33
LINC00963-210ENST00000608272 MYL6BP14649 208 aa17.12■□□□□ 0.33
LINC00963-210ENST00000608272 WASHC4Q2M389 1173 aa17.12■□□□□ 0.33
LINC00963-210ENST00000608272 EYA3Q99504 573 aa17.12■□□□□ 0.33
LINC00963-210ENST00000608272 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
LINC00963-210ENST00000608272 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
LINC00963-210ENST00000608272 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
LINC00963-210ENST00000608272 LAMB2P55268 1798 aa17.1■□□□□ 0.33
LINC00963-210ENST00000608272 PSMD14O00487 310 aa17.1■□□□□ 0.33
LINC00963-210ENST00000608272 SAMD7Q7Z3H4 446 aa17.1■□□□□ 0.33
LINC00963-210ENST00000608272 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
LINC00963-210ENST00000608272 POLR2AP24928 1970 aaKnown RBP17.09■□□□□ 0.33
LINC00963-210ENST00000608272 CFHR5Q9BXR6 569 aa17.09■□□□□ 0.33
LINC00963-210ENST00000608272 PNNQ9H307 717 aaKnown RBP17.09■□□□□ 0.33
LINC00963-210ENST00000608272 HDAC9Q9UKV0 1011 aa17.09■□□□□ 0.33
LINC00963-210ENST00000608272 PITPNM2Q9BZ72 1349 aa17.09■□□□□ 0.33
LINC00963-210ENST00000608272 PAPPA2Q9BXP8 1791 aa17.09■□□□□ 0.33
LINC00963-210ENST00000608272 KIF4BQ2VIQ3 1234 aa17.08■□□□□ 0.32
LINC00963-210ENST00000608272 TBC1D10BQ4KMP7 808 aaPredicted RBP17.08■□□□□ 0.32
LINC00963-210ENST00000608272 FBXO46Q6PJ61 603 aaPredicted RBP17.08■□□□□ 0.32
LINC00963-210ENST00000608272 NLRP10Q86W26 655 aa17.08■□□□□ 0.32
LINC00963-210ENST00000608272 RASAL3Q86YV0 1011 aa17.08■□□□□ 0.32
LINC00963-210ENST00000608272 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
LINC00963-210ENST00000608272 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
LINC00963-210ENST00000608272 ADM5C9JUS6 153 aa17.07■□□□□ 0.32
LINC00963-210ENST00000608272 VIL1P09327 827 aaKnown RBP17.07■□□□□ 0.32
LINC00963-210ENST00000608272 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
LINC00963-210ENST00000608272 SHTN1A0MZ66 631 aa17.06■□□□□ 0.32
LINC00963-210ENST00000608272 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
LINC00963-210ENST00000608272 PDIA6Q15084 440 aa17.06■□□□□ 0.32
LINC00963-210ENST00000608272 SF3B3Q15393 1217 aaKnown RBP17.06■□□□□ 0.32
LINC00963-210ENST00000608272 AGBL3Q8NEM8 1001 aa17.06■□□□□ 0.32
LINC00963-210ENST00000608272 CDCA5Q96FF9 252 aa17.06■□□□□ 0.32
LINC00963-210ENST00000608272 GGA3Q9NZ52 723 aa17.06■□□□□ 0.32
LINC00963-210ENST00000608272 TRMT112Q9UI30 125 aaKnown RBP17.06■□□□□ 0.32
LINC00963-210ENST00000608272 DLG5Q8TDM6 1919 aa17.06■□□□□ 0.32
LINC00963-210ENST00000608272 ECE2O60344 883 aa17.05■□□□□ 0.32
LINC00963-210ENST00000608272 TM4SF4P48230 202 aa17.05■□□□□ 0.32
LINC00963-210ENST00000608272 MMP14P50281 582 aa17.05■□□□□ 0.32
LINC00963-210ENST00000608272 ZNF280AP59817 542 aaPredicted RBP17.05■□□□□ 0.32
LINC00963-210ENST00000608272 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
LINC00963-210ENST00000608272 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
LINC00963-210ENST00000608272 HSP90B1P14625 803 aaKnown RBP17.04■□□□□ 0.32
LINC00963-210ENST00000608272 PPP2R1AP30153 589 aa17.04■□□□□ 0.32
LINC00963-210ENST00000608272 NFE2L2Q16236 605 aa17.04■□□□□ 0.32
LINC00963-210ENST00000608272 INTS3Q68E01 1043 aaKnown RBP17.04■□□□□ 0.32
LINC00963-210ENST00000608272 ZNF296Q8WUU4 475 aaPredicted RBP17.04■□□□□ 0.32
LINC00963-210ENST00000608272 DBNDD1Q9H9R9 158 aa17.04■□□□□ 0.32
LINC00963-210ENST00000608272 PODXL2Q9NZ53 605 aa17.04■□□□□ 0.32
LINC00963-210ENST00000608272 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
LINC00963-210ENST00000608272 EGFRP00533 1210 aa17.03■□□□□ 0.32
LINC00963-210ENST00000608272 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms