RNA–Protein interactions for RNA: ENST00000605467.1

PBX1-220, Transcript of PBX homeobox 1, humanhuman

Gene PBX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-220ENST00000605467 CCDC155Q8N6L0 562 aa8.16□□□□□ -1.1
PBX1-220ENST00000605467 CCDC74AQ96AQ1 378 aa8.16□□□□□ -1.1
PBX1-220ENST00000605467 GMCL1Q96IK5 515 aa8.16□□□□□ -1.1
PBX1-220ENST00000605467 NUCKS1Q9H1E3 243 aaKnown RBP8.16□□□□□ -1.1
PBX1-220ENST00000605467 CUEDC1Q9NWM3 386 aaPredicted RBP8.16□□□□□ -1.1
PBX1-220ENST00000605467 CNTN3Q9P232 1028 aa8.16□□□□□ -1.1
PBX1-220ENST00000605467 AK5Q9Y6K8 562 aa8.16□□□□□ -1.1
PBX1-220ENST00000605467 BNIP3LO60238 219 aa8.15□□□□□ -1.1
PBX1-220ENST00000605467 ITGAEP38570 1179 aa8.15□□□□□ -1.1
PBX1-220ENST00000605467 PSMD2Q13200 908 aa8.15□□□□□ -1.1
PBX1-220ENST00000605467 TSNAXIP1Q2TAA8 658 aa8.15□□□□□ -1.1
PBX1-220ENST00000605467 C1orf127Q8N9H9 656 aa8.15□□□□□ -1.1
PBX1-220ENST00000605467 ABI2Q9NYB9 513 aaPredicted RBP8.15□□□□□ -1.1
PBX1-220ENST00000605467 PHACTR2O75167 634 aa8.14□□□□□ -1.11
PBX1-220ENST00000605467 MAPTP10636 758 aaKnown RBP8.14□□□□□ -1.11
PBX1-220ENST00000605467 PMEPA1Q969W9 287 aa8.14□□□□□ -1.11
PBX1-220ENST00000605467 STRN4Q9NRL3 753 aa8.14□□□□□ -1.11
PBX1-220ENST00000605467 KHNYNO15037 678 aaKnown RBP8.13□□□□□ -1.11
PBX1-220ENST00000605467 SASH3O75995 380 aa8.13□□□□□ -1.11
PBX1-220ENST00000605467 CCINQ13939 588 aa8.13□□□□□ -1.11
PBX1-220ENST00000605467 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.13□□□□□ -1.11
PBX1-220ENST00000605467 GALNT12Q8IXK2 581 aa8.13□□□□□ -1.11
PBX1-220ENST00000605467 EFCC1Q9HA90 598 aa8.13□□□□□ -1.11
PBX1-220ENST00000605467 MRS2Q9HD23 443 aa8.13□□□□□ -1.11
PBX1-220ENST00000605467 GMPR2Q9P2T1 348 aaKnown RBP8.13□□□□□ -1.11
PBX1-220ENST00000605467 DCDC2BA2VCK2 349 aa8.12□□□□□ -1.11
PBX1-220ENST00000605467 SCAMP3O14828 347 aaKnown RBP8.12□□□□□ -1.11
PBX1-220ENST00000605467 GIPC1O14908 333 aa8.12□□□□□ -1.11
PBX1-220ENST00000605467 EREGO14944 169 aa8.12□□□□□ -1.11
PBX1-220ENST00000605467 ITGA6P23229 1130 aa8.12□□□□□ -1.11
PBX1-220ENST00000605467 TARSP26639 723 aaKnown RBP8.12□□□□□ -1.11
PBX1-220ENST00000605467 VEGFBP49765 207 aa8.12□□□□□ -1.11
PBX1-220ENST00000605467 EPS8L3Q8TE67 593 aaKnown RBP8.12□□□□□ -1.11
PBX1-220ENST00000605467 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
PBX1-220ENST00000605467 IRX2Q9BZI1 471 aaPredicted RBP8.12□□□□□ -1.11
PBX1-220ENST00000605467 MARK1Q9P0L2 795 aa8.12□□□□□ -1.11
PBX1-220ENST00000605467 SPG7Q9UQ90 795 aa8.12□□□□□ -1.11
PBX1-220ENST00000605467 CTSHP09668 335 aa8.11□□□□□ -1.11
PBX1-220ENST00000605467 IRS1P35568 1242 aa8.11□□□□□ -1.11
PBX1-220ENST00000605467 GRIN2CQ14957 1233 aa8.11□□□□□ -1.11
PBX1-220ENST00000605467 TTC39BQ5VTQ0 682 aaPredicted RBP8.11□□□□□ -1.11
PBX1-220ENST00000605467 PI16Q6UXB8 463 aa8.11□□□□□ -1.11
PBX1-220ENST00000605467 OR13H1Q8NG92 308 aa8.11□□□□□ -1.11
PBX1-220ENST00000605467 OSBPL7Q9BZF2 842 aa8.11□□□□□ -1.11
PBX1-220ENST00000605467 ZFATQ9P243 1243 aa8.11□□□□□ -1.11
PBX1-220ENST00000605467 MMP20O60882 483 aa8.1□□□□□ -1.11
PBX1-220ENST00000605467 SNRPBP14678 240 aaKnown RBP8.1□□□□□ -1.11
PBX1-220ENST00000605467 FAM182BQ5T319 152 aa8.1□□□□□ -1.11
PBX1-220ENST00000605467 TMEM87AQ8NBN3 555 aa8.1□□□□□ -1.11
PBX1-220ENST00000605467 VTI1BQ9UEU0 232 aa8.1□□□□□ -1.11
PBX1-220ENST00000605467 SALL4Q9UJQ4 1053 aa8.1□□□□□ -1.11
PBX1-220ENST00000605467 ATXN7L1Q9ULK2 861 aaPredicted RBP8.1□□□□□ -1.11
PBX1-220ENST00000605467 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
PBX1-220ENST00000605467 CYP2E1P05181 493 aaPredicted RBP8.09□□□□□ -1.11
PBX1-220ENST00000605467 POLR3DP05423 398 aaPredicted RBP8.09□□□□□ -1.11
PBX1-220ENST00000605467 CES1P23141 567 aa8.09□□□□□ -1.11
PBX1-220ENST00000605467 ABHD17AQ96GS6 310 aa8.09□□□□□ -1.11
PBX1-220ENST00000605467 SLC30A3Q99726 388 aa8.09□□□□□ -1.11
PBX1-220ENST00000605467 C12orf49Q9H741 205 aa8.09□□□□□ -1.11
PBX1-220ENST00000605467 NPHS2Q9NP85 383 aa8.09□□□□□ -1.11
PBX1-220ENST00000605467 METTL5Q9NRN9 209 aaKnown RBP8.09□□□□□ -1.11
PBX1-220ENST00000605467 NLRP2Q9NX02 1062 aa8.09□□□□□ -1.11
PBX1-220ENST00000605467 LCE2BO14633 110 aa8.08□□□□□ -1.12
PBX1-220ENST00000605467 MAP3K6O95382 1288 aa8.08□□□□□ -1.12
PBX1-220ENST00000605467 HOXD8P13378 290 aaPredicted RBP8.08□□□□□ -1.12
PBX1-220ENST00000605467 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
PBX1-220ENST00000605467 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
PBX1-220ENST00000605467 SPEM2Q0P670 501 aa8.08□□□□□ -1.12
PBX1-220ENST00000605467 KIAA0319Q5VV43 1072 aa8.08□□□□□ -1.12
PBX1-220ENST00000605467 KRT25Q7Z3Z0 450 aa8.08□□□□□ -1.12
PBX1-220ENST00000605467 METTL16Q86W50 562 aaKnown RBP8.08□□□□□ -1.12
PBX1-220ENST00000605467 GTPBP3Q969Y2 492 aaKnown RBP8.08□□□□□ -1.12
PBX1-220ENST00000605467 SRCIN1Q9C0H9 1055 aa8.08□□□□□ -1.12
PBX1-220ENST00000605467 TLR7Q9NYK1 1049 aaKnown RBP8.08□□□□□ -1.12
PBX1-220ENST00000605467 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
PBX1-220ENST00000605467 PPFIA3O75145 1194 aa8.07□□□□□ -1.12
PBX1-220ENST00000605467 RARAP10276 462 aa8.07□□□□□ -1.12
PBX1-220ENST00000605467 SOX18P35713 384 aa8.07□□□□□ -1.12
PBX1-220ENST00000605467 FANCCQ00597 558 aa8.07□□□□□ -1.12
PBX1-220ENST00000605467 PEAR1Q5VY43 1037 aaPredicted RBP8.07□□□□□ -1.12
PBX1-220ENST00000605467 NANOS1Q8WY41 292 aaKnown RBP8.07□□□□□ -1.12
PBX1-220ENST00000605467 CRELD1Q96HD1 420 aa8.07□□□□□ -1.12
PBX1-220ENST00000605467 POTECB2RU33 542 aa8.06□□□□□ -1.12
PBX1-220ENST00000605467 KIF4AO95239 1232 aa8.06□□□□□ -1.12
PBX1-220ENST00000605467 CD33P20138 364 aa8.06□□□□□ -1.12
PBX1-220ENST00000605467 BCO2Q9BYV7 579 aa8.06□□□□□ -1.12
PBX1-220ENST00000605467 SUV39H2Q9H5I1 410 aa8.06□□□□□ -1.12
PBX1-220ENST00000605467 PHF24Q9UPV7 400 aa8.06□□□□□ -1.12
PBX1-220ENST00000605467 USP31Q70CQ4 1352 aa8.06□□□□□ -1.12
PBX1-220ENST00000605467 A0A1W2PP55 124 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 EDN3P14138 238 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 NFKB1P19838 968 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 FGFR3P22607 806 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 GRM2Q14416 872 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 NXPE4Q6UWF7 544 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 GLIS3Q8NEA6 775 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 C8orf37Q96NL8 207 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 PNMA5Q96PV4 448 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 KANSL3Q9P2N6 904 aa8.05□□□□□ -1.12
PBX1-220ENST00000605467 FAM8A1Q9UBU6 413 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms