RNA–Protein interactions for RNA: ENST00000605467.1

PBX1-220, Transcript of PBX homeobox 1, humanhuman

Gene PBX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-220ENST00000605467 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
PBX1-220ENST00000605467 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
PBX1-220ENST00000605467 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
PBX1-220ENST00000605467 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
PBX1-220ENST00000605467 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
PBX1-220ENST00000605467 FOXD1Q16676 465 aa17.07■□□□□ 0.32
PBX1-220ENST00000605467 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
PBX1-220ENST00000605467 ADRA2BP18089 450 aa16.81■□□□□ 0.28
PBX1-220ENST00000605467 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
PBX1-220ENST00000605467 KCNA4P22459 653 aa16.02■□□□□ 0.16
PBX1-220ENST00000605467 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
PBX1-220ENST00000605467 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
PBX1-220ENST00000605467 MSH5O43196 834 aa15.53■□□□□ 0.08
PBX1-220ENST00000605467 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
PBX1-220ENST00000605467 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
PBX1-220ENST00000605467 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
PBX1-220ENST00000605467 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
PBX1-220ENST00000605467 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
PBX1-220ENST00000605467 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
PBX1-220ENST00000605467 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
PBX1-220ENST00000605467 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
PBX1-220ENST00000605467 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
PBX1-220ENST00000605467 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
PBX1-220ENST00000605467 ZBTB22O15209 634 aa14.78□□□□□ -0.04
PBX1-220ENST00000605467 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
PBX1-220ENST00000605467 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
PBX1-220ENST00000605467 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
PBX1-220ENST00000605467 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
PBX1-220ENST00000605467 ATXN8OSP0DMR3 200 aa14.09□□□□□ -0.15
PBX1-220ENST00000605467 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
PBX1-220ENST00000605467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
PBX1-220ENST00000605467 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
PBX1-220ENST00000605467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
PBX1-220ENST00000605467 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
PBX1-220ENST00000605467 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
PBX1-220ENST00000605467 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
PBX1-220ENST00000605467 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
PBX1-220ENST00000605467 FKBP8Q14318 412 aa13.54□□□□□ -0.24
PBX1-220ENST00000605467 APLP2Q06481 763 aa13.5□□□□□ -0.25
PBX1-220ENST00000605467 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
PBX1-220ENST00000605467 RNF39Q9H2S5 420 aa13.38□□□□□ -0.27
PBX1-220ENST00000605467 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
PBX1-220ENST00000605467 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
PBX1-220ENST00000605467 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
PBX1-220ENST00000605467 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
PBX1-220ENST00000605467 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
PBX1-220ENST00000605467 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
PBX1-220ENST00000605467 CAPN15O75808 1086 aa13.15□□□□□ -0.3
PBX1-220ENST00000605467 POLA2Q14181 598 aa13.15□□□□□ -0.3
PBX1-220ENST00000605467 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
PBX1-220ENST00000605467 FBLN2P98095 1184 aa13.08□□□□□ -0.32
PBX1-220ENST00000605467 PROM2Q8N271 834 aa13.03□□□□□ -0.32
PBX1-220ENST00000605467 ABCB7O75027 752 aa12.95□□□□□ -0.34
PBX1-220ENST00000605467 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
PBX1-220ENST00000605467 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
PBX1-220ENST00000605467 DSG3P32926 999 aa12.9□□□□□ -0.34
PBX1-220ENST00000605467 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
PBX1-220ENST00000605467 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
PBX1-220ENST00000605467 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
PBX1-220ENST00000605467 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
PBX1-220ENST00000605467 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
PBX1-220ENST00000605467 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
PBX1-220ENST00000605467 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
PBX1-220ENST00000605467 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
PBX1-220ENST00000605467 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
PBX1-220ENST00000605467 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
PBX1-220ENST00000605467 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
PBX1-220ENST00000605467 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
PBX1-220ENST00000605467 PKD2Q13563 968 aa12.43□□□□□ -0.42
PBX1-220ENST00000605467 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
PBX1-220ENST00000605467 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
PBX1-220ENST00000605467 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
PBX1-220ENST00000605467 MIER1Q8N108 512 aa12.34□□□□□ -0.43
PBX1-220ENST00000605467 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
PBX1-220ENST00000605467 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
PBX1-220ENST00000605467 PLCB2Q00722 1185 aa12.21□□□□□ -0.45
PBX1-220ENST00000605467 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
PBX1-220ENST00000605467 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
PBX1-220ENST00000605467 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
PBX1-220ENST00000605467 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
PBX1-220ENST00000605467 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
PBX1-220ENST00000605467 RGL2O15211 777 aa12.1□□□□□ -0.47
PBX1-220ENST00000605467 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
PBX1-220ENST00000605467 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
PBX1-220ENST00000605467 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
PBX1-220ENST00000605467 NUBP1P53384 320 aa12.04□□□□□ -0.48
PBX1-220ENST00000605467 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
PBX1-220ENST00000605467 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
PBX1-220ENST00000605467 CLEC11AQ9Y240 323 aa12.04□□□□□ -0.48
PBX1-220ENST00000605467 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
PBX1-220ENST00000605467 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
PBX1-220ENST00000605467 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
PBX1-220ENST00000605467 GSE1Q14687 1217 aa11.99□□□□□ -0.49
PBX1-220ENST00000605467 HAP1P54257 671 aaPredicted RBP11.96□□□□□ -0.49
PBX1-220ENST00000605467 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.96□□□□□ -0.49
PBX1-220ENST00000605467 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
PBX1-220ENST00000605467 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
PBX1-220ENST00000605467 RNF25Q96BH1 459 aaPredicted RBP11.9□□□□□ -0.5
PBX1-220ENST00000605467 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
PBX1-220ENST00000605467 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms