RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PRPF38AQ8NAV1 312 aaKnown RBP6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 KRTAP3-3Q9BYR6 98 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 IP6K2Q9UHH9 426 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 POLR1AO95602 1720 aaPredicted RBP6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 PTPRGP23470 1445 aa6.06□□□□□ -1.44
SPTBN1-206ENST00000602898 ERICH4A6NGS2 130 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 ABL1P00519 1130 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 BRD3Q15059 726 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 CCDC70Q6NSX1 233 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 RIC3Q7Z5B4 369 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 CCSER2Q9H7U1 834 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 CEP126Q9P2H0 1117 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 KIF14Q15058 1648 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 CCDC85CA6NKD9 419 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 SLC26A4O43511 780 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 U2AF1L5P0DN76 240 aaPredicted RBP6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 SRGNP10124 158 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 NAT1P18440 290 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 U2AF1Q01081 240 aaKnown RBP eCLIP6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 SF3B2Q13435 895 aaKnown RBP6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 RAI14Q9P0K7 980 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 LRP5O75197 1615 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 AKNAQ7Z591 1439 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 IGF1RP08069 1367 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 IFRD1O00458 451 aaPredicted RBP6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 IPO8O15397 1037 aaKnown RBP6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 BPNT1O95861 308 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 GPSM2P81274 684 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 CCDC92Q53HC0 331 aaPredicted RBP6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 MFSD4BQ5TF39 518 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 PRR7Q8TB68 274 aa6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 FEZ2Q9UHY8 353 aaPredicted RBP6.05□□□□□ -1.44
SPTBN1-206ENST00000602898 RNF17Q9BXT8 1623 aaKnown RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 ZFYVE16Q7Z3T8 1539 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NUTM2BA6NNL0 878 aaPredicted RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NUTM2EB1AL46 878 aaPredicted RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 AP1G2O75843 785 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 MAPK1P28482 360 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 SATB1Q01826 763 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NUTM2DQ5VT03 806 aaPredicted RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NBPF6Q5VWK0 638 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NUTM2GQ5VZR2 741 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 ALKBH2Q6NS38 261 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 CCDC174Q6PII3 467 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NBPF5PQ86XG9 351 aaPredicted RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NUTM2AQ8IVF1 878 aaPredicted RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 MRPL50Q8N5N7 158 aaKnown RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 BANK1Q8NDB2 785 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NBPF4Q96M43 638 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 CDK12Q9NYV4 1490 aaPredicted RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NCOA1Q15788 1441 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 PSDA5PKW4 1024 aaPredicted RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 H3BRB1 525 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 FANCCQ00597 558 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 RNF19BQ6ZMZ0 732 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 JAMLQ86YT9 394 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 NELL1Q92832 810 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 TUT1Q9H6E5 874 aaKnown RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 EFCC1Q9HA90 598 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 FAM13BQ9NYF5 915 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 CGNQ9P2M7 1197 aaKnown RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 CFAP65Q6ZU64 1925 aaKnown RBP6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 GOLGA3Q08378 1498 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 DISP1Q96F81 1524 aa6.04□□□□□ -1.44
SPTBN1-206ENST00000602898 DEPDC5O75140 1603 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 DYNC1I1O14576 645 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 PER1O15534 1290 aaPredicted RBP6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 OFD1O75665 1012 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 COPS2P61201 443 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 POU5F1BQ06416 359 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 ZNF394Q53GI3 561 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 RSBN1LQ6PCB5 846 aaPredicted RBP6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 CHCHD4Q8N4Q1 142 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 LRRN4Q8WUT4 740 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 BORCS6Q96GS4 357 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 CD248Q9HCU0 757 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 CASS4Q9NQ75 786 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 WBP1LQ9NX94 342 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 EVLQ9UI08 416 aaPredicted RBP6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 C3P01024 1663 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 hCG_1984214I3L0E3 225 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 TRAPPC10P48553 1259 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 PTPN5P54829 565 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 MAP2K1Q02750 393 aaPredicted RBP6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 CTDSPL2Q05D32 466 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 FAM98CQ17RN3 349 aaKnown RBP6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 BLOC1S3Q6QNY0 202 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 C14orf80Q86SX3 495 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 KCTD12Q96CX2 325 aaKnown RBP6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 C8orf48Q96LL4 319 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 ZBED9Q6R2W3 1325 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 KDM5CP41229 1560 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 CD109Q6YHK3 1445 aa6.03□□□□□ -1.44
SPTBN1-206ENST00000602898 FSD2A1L4K1 749 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 BHMG1C9JSJ3 638 aaPredicted RBP6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 RBP3P10745 1247 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 CDKN1CP49918 316 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms