RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TTC22Q5TAA0 569 aa10.96□□□□□ -0.66
CSMD1-217ENST00000602723 NAP1L3Q99457 506 aaPredicted RBP10.96□□□□□ -0.66
CSMD1-217ENST00000602723 CAMSAP2Q08AD1 1489 aa10.96□□□□□ -0.66
CSMD1-217ENST00000602723 IARSP41252 1262 aaKnown RBP10.96□□□□□ -0.66
CSMD1-217ENST00000602723 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.66
CSMD1-217ENST00000602723 LRRC27Q9C0I9 530 aa10.96□□□□□ -0.66
CSMD1-217ENST00000602723 STAT6P42226 847 aa10.96□□□□□ -0.66
CSMD1-217ENST00000602723 KCNG4Q8TDN1 519 aa10.96□□□□□ -0.66
CSMD1-217ENST00000602723 SLC26A6Q9BXS9 759 aa10.96□□□□□ -0.66
CSMD1-217ENST00000602723 ECHDC1Q9NTX5 307 aa10.96□□□□□ -0.66
CSMD1-217ENST00000602723 ZSCAN22P10073 491 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-217ENST00000602723 CCDC8Q9H0W5 538 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-217ENST00000602723 RPGRIP1LQ68CZ1 1315 aa10.95□□□□□ -0.66
CSMD1-217ENST00000602723 PRPHP41219 470 aa10.95□□□□□ -0.66
CSMD1-217ENST00000602723 APBB1IPQ7Z5R6 666 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-217ENST00000602723 CCDC94Q9BW85 323 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-217ENST00000602723 SMC6Q96SB8 1091 aa10.95□□□□□ -0.66
CSMD1-217ENST00000602723 EBAG9O00559 213 aa10.95□□□□□ -0.66
CSMD1-217ENST00000602723 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
CSMD1-217ENST00000602723 SEPT6Q14141 434 aa10.95□□□□□ -0.66
CSMD1-217ENST00000602723 CCDC174Q6PII3 467 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 BICD1Q96G01 975 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 CCDC77Q9BR77 488 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 SSX2IPQ9Y2D8 614 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 TSHZ3Q63HK5 1081 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 MYO10Q9HD67 2058 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 PDE4BQ07343 736 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 F6X3S4 739 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 TUBB4BP68371 445 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 GTPBP4Q9BZE4 634 aaKnown RBP10.94□□□□□ -0.66
CSMD1-217ENST00000602723 SAMM50Q9Y512 469 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 KRT13P13646 458 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 HAND2P61296 217 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 TMOD3Q9NYL9 352 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 RAB3IL1Q8TBN0 382 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 TACC1O75410 805 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 RRAGBQ5VZM2 374 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 THEMISQ8N1K5 641 aaPredicted RBP10.94□□□□□ -0.66
CSMD1-217ENST00000602723 SPAG5Q96R06 1193 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 ANAPC4Q9UJX5 808 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
CSMD1-217ENST00000602723 PTGS1P23219 599 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 CLCN1P35523 988 aa10.94□□□□□ -0.66
CSMD1-217ENST00000602723 NCOA7Q8NI08 942 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 TROQ12816 1431 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-217ENST00000602723 IRX3P78415 501 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-217ENST00000602723 CAPZA3Q96KX2 299 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 SF3B2Q13435 895 aaKnown RBP10.93□□□□□ -0.66
CSMD1-217ENST00000602723 OTUD6BQ8N6M0 293 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 CEP83Q9Y592 693 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 HSP90AA4PQ58FG1 418 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 TUBB4AP04350 444 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 MICALL1Q8N3F8 863 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 CDK13Q14004 1512 aaKnown RBP10.93□□□□□ -0.66
CSMD1-217ENST00000602723 IQGAP2Q13576 1575 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 BMP15O95972 392 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 AFMP43652 599 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 RAB11FIP4Q86YS3 637 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 PPFIA3O75145 1194 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 KAT14Q9H8E8 782 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 VPS18Q9P253 973 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 ARL1P40616 181 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-217ENST00000602723 AMOTQ4VCS5 1084 aa10.93□□□□□ -0.66
CSMD1-217ENST00000602723 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 SPAG1Q07617 926 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 USP48Q86UV5 1035 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 MMRN2Q9H8L6 949 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 ATP2A1O14983 1001 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 MRPS27Q92552 414 aaKnown RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 V9GYY5 206 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 NOL3O60936 208 aaKnown RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 DDX46Q7L014 1031 aaKnown RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 RPGRQ92834 1020 aaKnown RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 RTL1A6NKG5 1358 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 ZEB2O60315 1214 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 GSTA5Q7RTV2 222 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 SELENOSQ9BQE4 189 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 ZWINTO95229 277 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 MRPS9P82933 396 aaKnown RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 NUTM2BA6NNL0 878 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 NUTM2EB1AL46 878 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 NUTM2AQ8IVF1 878 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-217ENST00000602723 PIK3R4Q99570 1358 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 TYRO3Q06418 890 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 KCNH5Q8NCM2 988 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 NEK1Q96PY6 1258 aa10.92□□□□□ -0.66
CSMD1-217ENST00000602723 FLIIQ13045 1269 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 DBF4Q9UBU7 674 aaPredicted RBP10.91□□□□□ -0.66
CSMD1-217ENST00000602723 RSRC1Q96IZ7 334 aaKnown RBP10.91□□□□□ -0.66
CSMD1-217ENST00000602723 CCDC114Q96M63 670 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 PSMC4P43686 418 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 NUCB1Q02818 461 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 CPLX4Q7Z7G2 160 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 WDR66Q8TBY9 1149 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 LRRC45Q96CN5 670 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 RALGAPBQ86X10 1494 aa10.91□□□□□ -0.66
CSMD1-217ENST00000602723 XRCC6P12956 609 aaKnown RBP eCLIP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms