RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	FEZ1	Q99689	392 aa		6.6	□□□□□ -1.35
PAF1-208	ENST00000598594	FAM126A	Q9BYI3	521 aa	Predicted RBP	6.6	□□□□□ -1.35
PAF1-208	ENST00000598594	ADAM33	Q9BZ11	813 aa		6.6	□□□□□ -1.35
PAF1-208	ENST00000598594	MRPS23	Q9Y3D9	190 aa	Known RBP	6.6	□□□□□ -1.35
PAF1-208	ENST00000598594	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.6	□□□□□ -1.35
PAF1-208	ENST00000598594	MRVI1	Q9Y6F6	885 aa		6.6	□□□□□ -1.35
PAF1-208	ENST00000598594	ITGBL1	O95965	494 aa	Predicted RBP	6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	TERF1	P54274	439 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	CCDC96	Q2M329	555 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	GRAMD1B	Q3KR37	738 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	TRAF7	Q6Q0C0	670 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	CASC1	Q6TDU7	716 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	SLC4A10	Q6U841	1118 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	NYAP1	Q6ZVC0	841 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	ARMCX6	Q7L4S7	300 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	LRP10	Q7Z4F1	713 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	FTSJ3	Q8IY81	847 aa	Known RBP	6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	MYO1H	Q8N1T3	1032 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	CCDC89	Q8N998	374 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	ANKK1	Q8NFD2	765 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	HNRNPLL	Q8WVV9	542 aa	Known RBP	6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	E2F7	Q96AV8	911 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	RABGEF1	Q9UJ41	708 aa		6.59	□□□□□ -1.35
PAF1-208	ENST00000598594		V9GY48	417 aa	Predicted RBP	6.59	□□□□□ -1.35
PAF1-208	ENST00000598594	SHTN1	A0MZ66	631 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	GOLGA6C	A6NDK9	693 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	GOLGA6B	A6NDN3	693 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594		A6NJY4	79 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	SCGB1D2	O95969	90 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	GOLGA6D	P0CG33	693 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	WEE1	P30291	646 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	CTH	P32929	405 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	SLC4A3	P48751	1232 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	SIM2	Q14190	667 aa	Predicted RBP	6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	TKFC	Q3LXA3	575 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	C6orf132	Q5T0Z8	1188 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	ACBD5	Q5T8D3	534 aa	Predicted RBP	6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	LAPTM4B	Q86VI4	370 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	TTC30B	Q8N4P2	665 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	TEX19	Q8NA77	164 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	NGDN	Q8NEJ9	315 aa	Known RBP	6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	RASGRP4	Q8TDF6	673 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	SYMPK	Q92797	1274 aa	Known RBP	6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	ALKBH8	Q96BT7	664 aa	Known RBP	6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	SEC16B	Q96JE7	1060 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	FAM129B	Q96TA1	746 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	EYA1	Q99502	592 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	NIF3L1	Q9GZT8	377 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	IFT122	Q9HBG6	1241 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	PTPRH	Q9HD43	1115 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	TMEM260	Q9NX78	707 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	GOLGA6A	Q9NYA3	693 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	NUB1	Q9Y5A7	615 aa		6.58	□□□□□ -1.36
PAF1-208	ENST00000598594	MYL3	P08590	195 aa		6.57	□□□□□ -1.36
PAF1-208	ENST00000598594	GCGR	P47871	477 aa		6.57	□□□□□ -1.36
PAF1-208	ENST00000598594	TSGA10IP	Q3SY00	556 aa		6.57	□□□□□ -1.36
PAF1-208	ENST00000598594	CC2D1A	Q6P1N0	951 aa	Predicted RBP	6.57	□□□□□ -1.36
PAF1-208	ENST00000598594	TTC8	Q8TAM2	541 aa		6.57	□□□□□ -1.36
PAF1-208	ENST00000598594	CHIC2	Q9UKJ5	165 aa		6.57	□□□□□ -1.36
PAF1-208	ENST00000598594	PPP2R3B	Q9Y5P8	575 aa		6.57	□□□□□ -1.36
PAF1-208	ENST00000598594	SLC26A4	O43511	780 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	FZD6	O60353	706 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	POU3F3	P20264	500 aa	Predicted RBP	6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	NASP	P49321	788 aa	Predicted RBP	6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	GTF2I	P78347	998 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	SQSTM1	Q13501	440 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	MORC3	Q14149	939 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	PUS10	Q3MIT2	529 aa	Known RBP	6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	CCDC70	Q6NSX1	233 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	DDX42	Q86XP3	938 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	GAS2L2	Q8NHY3	880 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	COL26A1	Q96A83	441 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	CDCA7L	Q96GN5	454 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	TSPAN18	Q96SJ8	248 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	TAGLN3	Q9UI15	199 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	NOL7	Q9UMY1	257 aa	Known RBP	6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	SPG7	Q9UQ90	795 aa		6.56	□□□□□ -1.36
PAF1-208	ENST00000598594	WASHC2C	Q9Y4E1	1318 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	TTC36	A6NLP5	189 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	ALG1L2	C9J202	215 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	KCNQ2	O43526	872 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	RNASEH2A	O75792	299 aa	Known RBP	6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	DNAJB2	P25686	324 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	MCL1	Q07820	350 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	KANK3	Q6NY19	840 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	MUC3B	Q9H195	1237 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	ZNF69	Q9UC07	566 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	FKBPL	Q9UIM3	349 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	CDV3	Q9UKY7	258 aa	Known RBP	6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	LEMD3	Q9Y2U8	911 aa		6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	R3HCC1	Q9Y3T6	440 aa	Known RBP	6.55	□□□□□ -1.36
PAF1-208	ENST00000598594	TMEM238L	A0A1B0GVL6	79 aa		6.54	□□□□□ -1.36
PAF1-208	ENST00000598594	BICDL2	A1A5D9	508 aa		6.54	□□□□□ -1.36
PAF1-208	ENST00000598594	EIF4B	P23588	611 aa	Known RBP	6.54	□□□□□ -1.36
PAF1-208	ENST00000598594	CASP2	P42575	452 aa		6.54	□□□□□ -1.36
PAF1-208	ENST00000598594	EIF1AX	P47813	144 aa	Known RBP	6.54	□□□□□ -1.36
PAF1-208	ENST00000598594	RAB27A	P51159	221 aa		6.54	□□□□□ -1.36
PAF1-208	ENST00000598594	IFRD2	Q12894	506 aa	Predicted RBP	6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms