RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 INTS4Q96HW7 963 aaKnown RBP14.65□□□□□ -0.06
USHBP1-207ENST00000597928 KINO60870 393 aaKnown RBP14.64□□□□□ -0.07
USHBP1-207ENST00000597928 LRMPQ12912 555 aa14.64□□□□□ -0.07
USHBP1-207ENST00000597928 TTC6Q86TZ1 520 aa14.64□□□□□ -0.07
USHBP1-207ENST00000597928 ZNF165P49910 485 aa14.64□□□□□ -0.07
USHBP1-207ENST00000597928 CCDC57Q2TAC2 916 aa14.64□□□□□ -0.07
USHBP1-207ENST00000597928 CEP126Q9P2H0 1117 aa14.64□□□□□ -0.07
USHBP1-207ENST00000597928 MTMR6Q9Y217 621 aa14.64□□□□□ -0.07
USHBP1-207ENST00000597928 CYP2E1P05181 493 aaPredicted RBP14.64□□□□□ -0.07
USHBP1-207ENST00000597928 STK38Q15208 465 aa14.64□□□□□ -0.07
USHBP1-207ENST00000597928 PTPN21Q16825 1174 aa14.64□□□□□ -0.07
USHBP1-207ENST00000597928 CNNM1Q9NRU3 951 aa14.64□□□□□ -0.07
USHBP1-207ENST00000597928 TTLL7Q6ZT98 887 aa14.63□□□□□ -0.07
USHBP1-207ENST00000597928 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
USHBP1-207ENST00000597928 DDX21Q9NR30 783 aaKnown RBP eCLIP14.63□□□□□ -0.07
USHBP1-207ENST00000597928 STAP2Q9UGK3 403 aa14.63□□□□□ -0.07
USHBP1-207ENST00000597928 VPS53Q5VIR6 699 aa14.63□□□□□ -0.07
USHBP1-207ENST00000597928 CCAR2Q8N163 923 aaKnown RBP14.63□□□□□ -0.07
USHBP1-207ENST00000597928 FAM89AQ96GI7 184 aa14.63□□□□□ -0.07
USHBP1-207ENST00000597928 NRBP1Q9UHY1 535 aa14.63□□□□□ -0.07
USHBP1-207ENST00000597928 HIP1O00291 1037 aa14.62□□□□□ -0.07
USHBP1-207ENST00000597928 CUL4AQ13619 759 aa14.62□□□□□ -0.07
USHBP1-207ENST00000597928 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
USHBP1-207ENST00000597928 SH2B1Q9NRF2 756 aaPredicted RBP14.62□□□□□ -0.07
USHBP1-207ENST00000597928 GJB4Q9NTQ9 266 aa14.62□□□□□ -0.07
USHBP1-207ENST00000597928 TYRO3Q06418 890 aa14.62□□□□□ -0.07
USHBP1-207ENST00000597928 GCKRQ14397 625 aa14.62□□□□□ -0.07
USHBP1-207ENST00000597928 ZHX1Q9UKY1 873 aaPredicted RBP14.62□□□□□ -0.07
USHBP1-207ENST00000597928 PI16Q6UXB8 463 aa14.61□□□□□ -0.07
USHBP1-207ENST00000597928 IFNL2Q8IZJ0 200 aa14.61□□□□□ -0.07
USHBP1-207ENST00000597928 DBNLQ9UJU6 430 aaKnown RBP14.61□□□□□ -0.07
USHBP1-207ENST00000597928 A0A0G2JLW4 131 aa14.61□□□□□ -0.07
USHBP1-207ENST00000597928 SNRPA1P09661 255 aaKnown RBP14.61□□□□□ -0.07
USHBP1-207ENST00000597928 MARCKSP29966 332 aaPredicted RBP14.61□□□□□ -0.07
USHBP1-207ENST00000597928 LRRC24Q50LG9 513 aa14.61□□□□□ -0.07
USHBP1-207ENST00000597928 RGS12O14924 1447 aa14.61□□□□□ -0.07
USHBP1-207ENST00000597928 NR1I2O75469 434 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 IGKV5-2P06315 115 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
USHBP1-207ENST00000597928 PUS3Q9BZE2 481 aaKnown RBP14.6□□□□□ -0.07
USHBP1-207ENST00000597928 NEURL1BA8MQ27 555 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 ALDH1L1O75891 902 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 TRDNQ13061 729 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 FSIP1Q8NA03 581 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 ANKRD1Q15327 319 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 TNNI3KQ59H18 835 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 HOMER1Q86YM7 354 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 FPGT-TNNI3KV9GXZ4 949 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 ADGRB2O60241 1585 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 CEP170BQ9Y4F5 1589 aaPredicted RBP14.6□□□□□ -0.07
USHBP1-207ENST00000597928 TTC41PQ6P2S7 1318 aa14.6□□□□□ -0.07
USHBP1-207ENST00000597928 CLTCQ00610 1675 aaKnown RBP14.59□□□□□ -0.07
USHBP1-207ENST00000597928 KIF24Q5T7B8 1368 aa14.59□□□□□ -0.07
USHBP1-207ENST00000597928 PYCARDQ9ULZ3 195 aa14.59□□□□□ -0.07
USHBP1-207ENST00000597928 A0A1B0GVL5 298 aa14.59□□□□□ -0.07
USHBP1-207ENST00000597928 METTL24Q5JXM2 366 aa14.59□□□□□ -0.07
USHBP1-207ENST00000597928 CCDC158Q5M9N0 1113 aa14.59□□□□□ -0.07
USHBP1-207ENST00000597928 LETM1O95202 739 aaPredicted RBP14.59□□□□□ -0.07
USHBP1-207ENST00000597928 GTF2E1P29083 439 aaPredicted RBP14.59□□□□□ -0.07
USHBP1-207ENST00000597928 MICU3Q86XE3 530 aa14.59□□□□□ -0.07
USHBP1-207ENST00000597928 PDILTQ8N807 584 aa14.59□□□□□ -0.07
USHBP1-207ENST00000597928 NCOA3Q9Y6Q9 1424 aa14.59□□□□□ -0.07
USHBP1-207ENST00000597928 RPS6KB1P23443 525 aa14.58□□□□□ -0.07
USHBP1-207ENST00000597928 SYNE4Q8N205 404 aa14.58□□□□□ -0.07
USHBP1-207ENST00000597928 NUP133Q8WUM0 1156 aa14.58□□□□□ -0.07
USHBP1-207ENST00000597928 PTPRUQ92729 1446 aa14.58□□□□□ -0.07
USHBP1-207ENST00000597928 GOLGA8BA8MQT2 603 aa14.58□□□□□ -0.08
USHBP1-207ENST00000597928 POLA2Q14181 598 aa14.58□□□□□ -0.08
USHBP1-207ENST00000597928 TMEM131LA2VDJ0 1609 aa14.58□□□□□ -0.08
USHBP1-207ENST00000597928 MCMDC2Q4G0Z9 681 aa14.58□□□□□ -0.08
USHBP1-207ENST00000597928 MYL10Q9BUA6 226 aa14.58□□□□□ -0.08
USHBP1-207ENST00000597928 CFAP74Q9C0B2 1584 aa14.57□□□□□ -0.08
USHBP1-207ENST00000597928 PES1O00541 588 aaKnown RBP14.57□□□□□ -0.08
USHBP1-207ENST00000597928 BICDL1Q6ZP65 573 aa14.57□□□□□ -0.08
USHBP1-207ENST00000597928 SCAND2PQ9GZW5 306 aaPredicted RBP14.57□□□□□ -0.08
USHBP1-207ENST00000597928 TBC1D2BQ9UPU7 963 aa14.57□□□□□ -0.08
USHBP1-207ENST00000597928 KIF3AQ9Y496 699 aa14.57□□□□□ -0.08
USHBP1-207ENST00000597928 PTPDC1A2A3K4 754 aa14.57□□□□□ -0.08
USHBP1-207ENST00000597928 SNAP23O00161 211 aa14.57□□□□□ -0.08
USHBP1-207ENST00000597928 PAG1Q9NWQ8 432 aa14.57□□□□□ -0.08
USHBP1-207ENST00000597928 ADCY9O60503 1353 aa14.57□□□□□ -0.08
USHBP1-207ENST00000597928 SIRT1Q96EB6 747 aa14.57□□□□□ -0.08
USHBP1-207ENST00000597928 LEO1Q8WVC0 666 aaPredicted RBP14.56□□□□□ -0.08
USHBP1-207ENST00000597928 ZSWIM6Q9HCJ5 1215 aa14.56□□□□□ -0.08
USHBP1-207ENST00000597928 KLF18A0A0U1RQI7 1052 aa14.56□□□□□ -0.08
USHBP1-207ENST00000597928 SPECC1Q5M775 1068 aa14.56□□□□□ -0.08
USHBP1-207ENST00000597928 PPP4R3BQ5MIZ7 849 aa14.56□□□□□ -0.08
USHBP1-207ENST00000597928 LDHAL6AQ6ZMR3 332 aa14.56□□□□□ -0.08
USHBP1-207ENST00000597928 ZKSCAN3Q9BRR0 538 aa14.56□□□□□ -0.08
USHBP1-207ENST00000597928 SLC52A2Q9HAB3 445 aa14.56□□□□□ -0.08
USHBP1-207ENST00000597928 CBX8Q9HC52 389 aa14.56□□□□□ -0.08
USHBP1-207ENST00000597928 ABCF2Q9UG63 623 aa14.56□□□□□ -0.08
USHBP1-207ENST00000597928 CYP21A2P08686 494 aa14.55□□□□□ -0.08
USHBP1-207ENST00000597928 METTL22Q9BUU2 404 aaPredicted RBP14.55□□□□□ -0.08
USHBP1-207ENST00000597928 CWC25Q9NXE8 425 aaPredicted RBP14.55□□□□□ -0.08
USHBP1-207ENST00000597928 TNNT1P13805 278 aa14.55□□□□□ -0.08
USHBP1-207ENST00000597928 ARID5BQ14865 1188 aa14.55□□□□□ -0.08
USHBP1-207ENST00000597928 ARHGEF25Q86VW2 580 aa14.55□□□□□ -0.08
USHBP1-207ENST00000597928 PREX1Q8TCU6 1659 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms