RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 CDCA5Q96FF9 252 aa8.81□□□□□ -1
DNMT1-222ENST00000590619 TRIM17Q9Y577 477 aa8.81□□□□□ -1
DNMT1-222ENST00000590619 ABCC12Q96J65 1359 aa8.81□□□□□ -1
DNMT1-222ENST00000590619 KIAA0100Q14667 2235 aaKnown RBP8.81□□□□□ -1
DNMT1-222ENST00000590619 PITPNM2Q9BZ72 1349 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 UBE2Q2LH0YL09 131 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 TEFQ10587 303 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 CHRDL2Q6WN34 429 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 OTOP1Q7RTM1 612 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 MPNDQ8N594 471 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 NYXQ9GZU5 481 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 TMX4Q9H1E5 349 aaPredicted RBP8.8□□□□□ -1
DNMT1-222ENST00000590619 SCN7AQ01118 1682 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 COL6A3P12111 3177 aa8.8□□□□□ -1
DNMT1-222ENST00000590619 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
DNMT1-222ENST00000590619 POLR2AP24928 1970 aaKnown RBP8.79□□□□□ -1
DNMT1-222ENST00000590619 CUL9Q8IWT3 2517 aa8.79□□□□□ -1
DNMT1-222ENST00000590619 PSMD14O00487 310 aa8.79□□□□□ -1
DNMT1-222ENST00000590619 SUSD4Q5VX71 490 aa8.79□□□□□ -1
DNMT1-222ENST00000590619 DPP8Q6V1X1 898 aaPredicted RBP8.79□□□□□ -1
DNMT1-222ENST00000590619 SULF1Q8IWU6 871 aa8.79□□□□□ -1
DNMT1-222ENST00000590619 SP8Q8IXZ3 490 aa8.79□□□□□ -1
DNMT1-222ENST00000590619 KCNQ5Q9NR82 932 aa8.79□□□□□ -1
DNMT1-222ENST00000590619 PTPN22Q9Y2R2 807 aa8.79□□□□□ -1
DNMT1-222ENST00000590619 BTBD11A6QL63 1104 aa8.78□□□□□ -1
DNMT1-222ENST00000590619 BBOX1O75936 387 aa8.78□□□□□ -1
DNMT1-222ENST00000590619 FKBP1BP68106 108 aa8.78□□□□□ -1
DNMT1-222ENST00000590619 MORC1Q86VD1 984 aa8.78□□□□□ -1
DNMT1-222ENST00000590619 ARMC5Q96C12 935 aa8.78□□□□□ -1
DNMT1-222ENST00000590619 GNAT3A8MTJ3 354 aa8.77□□□□□ -1.01
DNMT1-222ENST00000590619 SNRPA1P09661 255 aaKnown RBP8.77□□□□□ -1.01
DNMT1-222ENST00000590619 MKRN3Q13064 507 aaKnown RBP8.77□□□□□ -1.01
DNMT1-222ENST00000590619 NGEFQ8N5V2 710 aa8.77□□□□□ -1.01
DNMT1-222ENST00000590619 NLRP3Q96P20 1036 aa8.77□□□□□ -1.01
DNMT1-222ENST00000590619 TMEM106CQ9BVX2 250 aa8.77□□□□□ -1.01
DNMT1-222ENST00000590619 GGA3Q9NZ52 723 aa8.77□□□□□ -1.01
DNMT1-222ENST00000590619 BRCA2P51587 3418 aa8.77□□□□□ -1.01
DNMT1-222ENST00000590619 CENPFP49454 3210 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 ERVV-1B6SEH8 477 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 GPTP24298 496 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 SCARF1Q14162 830 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 KIF4BQ2VIQ3 1234 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 SLC10A5Q5PT55 438 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 ANGEL2Q5VTE6 544 aaKnown RBP8.76□□□□□ -1.01
DNMT1-222ENST00000590619 PRAMEF18Q5VWM3 479 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 COL25A1Q9BXS0 654 aaPredicted RBP8.76□□□□□ -1.01
DNMT1-222ENST00000590619 PRO3102Q9H379 93 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 PANK3Q9H999 370 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 SCAF8Q9UPN6 1271 aaKnown RBP8.76□□□□□ -1.01
DNMT1-222ENST00000590619 UBR2Q8IWV8 1755 aa8.76□□□□□ -1.01
DNMT1-222ENST00000590619 CEP290O15078 2479 aa8.75□□□□□ -1.01
DNMT1-222ENST00000590619 RIC1Q4ADV7 1423 aa8.75□□□□□ -1.01
DNMT1-222ENST00000590619 WTIPA6NIX2 430 aaPredicted RBP8.75□□□□□ -1.01
DNMT1-222ENST00000590619 RPS12P25398 132 aaKnown RBP8.75□□□□□ -1.01
DNMT1-222ENST00000590619 CAP1Q01518 475 aa8.75□□□□□ -1.01
DNMT1-222ENST00000590619 ZNF34Q8IZ26 560 aa8.75□□□□□ -1.01
DNMT1-222ENST00000590619 DBNDD1Q9H9R9 158 aa8.75□□□□□ -1.01
DNMT1-222ENST00000590619 ABCC4O15439 1325 aa8.75□□□□□ -1.01
DNMT1-222ENST00000590619 UBN2Q6ZU65 1347 aa8.75□□□□□ -1.01
DNMT1-222ENST00000590619 SOX1O00570 391 aaPredicted RBP8.74□□□□□ -1.01
DNMT1-222ENST00000590619 RIMBP2O15034 1052 aa8.74□□□□□ -1.01
DNMT1-222ENST00000590619 NTSR2O95665 410 aa8.74□□□□□ -1.01
DNMT1-222ENST00000590619 VIL1P09327 827 aaKnown RBP8.74□□□□□ -1.01
DNMT1-222ENST00000590619 SREBF2Q12772 1141 aa8.74□□□□□ -1.01
DNMT1-222ENST00000590619 WASHC4Q2M389 1173 aa8.74□□□□□ -1.01
DNMT1-222ENST00000590619 TTLL7Q6ZT98 887 aa8.74□□□□□ -1.01
DNMT1-222ENST00000590619 ZNF333Q96JL9 665 aa8.74□□□□□ -1.01
DNMT1-222ENST00000590619 POLR3GLQ9BT43 218 aa8.74□□□□□ -1.01
DNMT1-222ENST00000590619 HTTP42858 3142 aa8.74□□□□□ -1.01
DNMT1-222ENST00000590619 RANBP2P49792 3224 aaKnown RBP8.74□□□□□ -1.01
DNMT1-222ENST00000590619 ALDH1A1P00352 501 aa8.73□□□□□ -1.01
DNMT1-222ENST00000590619 PTPN12Q05209 780 aaKnown RBP8.73□□□□□ -1.01
DNMT1-222ENST00000590619 DOK7Q18PE1 504 aa8.73□□□□□ -1.01
DNMT1-222ENST00000590619 CD99L2Q8TCZ2 262 aa8.73□□□□□ -1.01
DNMT1-222ENST00000590619 DPF3Q92784 378 aa8.73□□□□□ -1.01
DNMT1-222ENST00000590619 LRCH3Q96II8 777 aa8.73□□□□□ -1.01
DNMT1-222ENST00000590619 MAP3K15Q6ZN16 1313 aa8.73□□□□□ -1.01
DNMT1-222ENST00000590619 RTL9Q8NET4 1388 aa8.73□□□□□ -1.01
DNMT1-222ENST00000590619 PAPPA2Q9BXP8 1791 aa8.72□□□□□ -1.01
DNMT1-222ENST00000590619 ZNF280AP59817 542 aaPredicted RBP8.72□□□□□ -1.01
DNMT1-222ENST00000590619 SLC4A8Q2Y0W8 1093 aa8.72□□□□□ -1.01
DNMT1-222ENST00000590619 SPRYD7Q5W111 196 aa8.72□□□□□ -1.01
DNMT1-222ENST00000590619 IFNL1Q8IU54 200 aa8.72□□□□□ -1.01
DNMT1-222ENST00000590619 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
DNMT1-222ENST00000590619 ERO1AQ96HE7 468 aa8.72□□□□□ -1.01
DNMT1-222ENST00000590619 EFCC1Q9HA90 598 aa8.72□□□□□ -1.01
DNMT1-222ENST00000590619 POLLQ9UGP5 575 aa8.72□□□□□ -1.01
DNMT1-222ENST00000590619 CEMIPQ8WUJ3 1361 aa8.72□□□□□ -1.01
DNMT1-222ENST00000590619 DIAPH1O60610 1272 aaKnown RBP8.71□□□□□ -1.02
DNMT1-222ENST00000590619 MYCP01106 439 aaPredicted RBP8.71□□□□□ -1.02
DNMT1-222ENST00000590619 INHBEP58166 350 aa8.71□□□□□ -1.02
DNMT1-222ENST00000590619 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
DNMT1-222ENST00000590619 PPP1R42Q7Z4L9 355 aa8.71□□□□□ -1.02
DNMT1-222ENST00000590619 ZBTB3Q9H5J0 574 aa8.71□□□□□ -1.02
DNMT1-222ENST00000590619 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.02
DNMT1-222ENST00000590619 IGF2BP3O00425 579 aaKnown RBP eCLIP8.7□□□□□ -1.02
DNMT1-222ENST00000590619 ECE2O60344 883 aa8.7□□□□□ -1.02
DNMT1-222ENST00000590619 HCLS1P14317 486 aaPredicted RBP8.7□□□□□ -1.02
DNMT1-222ENST00000590619 GRAPQ13588 217 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms