RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ATP2B1P20020 1258 aa12.36□□□□□ -0.43
RFFL-212ENST00000584655 TFCP2L1Q9NZI6 479 aa12.36□□□□□ -0.43
RFFL-212ENST00000584655 TFIP11Q9UBB9 837 aaKnown RBP12.36□□□□□ -0.43
RFFL-212ENST00000584655 ZKSCAN1P17029 563 aaPredicted RBP12.36□□□□□ -0.43
RFFL-212ENST00000584655 HSPA1LP34931 641 aa12.35□□□□□ -0.43
RFFL-212ENST00000584655 TRIM37O94972 964 aa12.35□□□□□ -0.43
RFFL-212ENST00000584655 ITPK1Q13572 414 aa12.35□□□□□ -0.43
RFFL-212ENST00000584655 RABEP1Q15276 862 aa12.35□□□□□ -0.43
RFFL-212ENST00000584655 ZAP70P43403 619 aa12.35□□□□□ -0.43
RFFL-212ENST00000584655 AK2P54819 239 aa12.35□□□□□ -0.43
RFFL-212ENST00000584655 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
RFFL-212ENST00000584655 HEG1Q9ULI3 1381 aa12.35□□□□□ -0.43
RFFL-212ENST00000584655 RAD21O60216 631 aa12.34□□□□□ -0.43
RFFL-212ENST00000584655 CAMTA1Q9Y6Y1 1673 aa12.34□□□□□ -0.43
RFFL-212ENST00000584655 ZKSCAN3Q9BRR0 538 aa12.34□□□□□ -0.43
RFFL-212ENST00000584655 GOLGA6L22H0YM25 854 aa12.34□□□□□ -0.43
RFFL-212ENST00000584655 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
RFFL-212ENST00000584655 PDRG1Q9NUG6 133 aa12.34□□□□□ -0.43
RFFL-212ENST00000584655 TCIRG1Q13488 830 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 SUSD4Q5VX71 490 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 USPL1Q5W0Q7 1092 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 CHMP4AQ9BY43 222 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 OTUD7BQ6GQQ9 843 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 DENND2AQ9ULE3 1009 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 MON2Q7Z3U7 1717 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 XAGE2Q96GT9 111 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 SNX14Q9Y5W7 946 aa12.33□□□□□ -0.44
RFFL-212ENST00000584655 MINDY4BA8MYZ0 360 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 BCAMP50895 628 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
RFFL-212ENST00000584655 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 F8W031 263 aaPredicted RBP12.32□□□□□ -0.44
RFFL-212ENST00000584655 ATP2B3Q16720 1220 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 RUFY2Q8WXA3 655 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 GBP4Q96PP9 640 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
RFFL-212ENST00000584655 PHKA1P46020 1223 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 GYG1P46976 350 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 POLA2Q14181 598 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 BRF1Q92994 677 aa12.32□□□□□ -0.44
RFFL-212ENST00000584655 CCNL1Q9UK58 526 aaPredicted RBP12.32□□□□□ -0.44
RFFL-212ENST00000584655 SGSM2O43147 1006 aa12.31□□□□□ -0.44
RFFL-212ENST00000584655 RBM25P49756 843 aaKnown RBP12.31□□□□□ -0.44
RFFL-212ENST00000584655 MYL10Q9BUA6 226 aa12.31□□□□□ -0.44
RFFL-212ENST00000584655 SLC9C2Q5TAH2 1124 aa12.31□□□□□ -0.44
RFFL-212ENST00000584655 ANKRD18BA2A2Z9 1011 aa12.31□□□□□ -0.44
RFFL-212ENST00000584655 PRDM1O75626 825 aa12.31□□□□□ -0.44
RFFL-212ENST00000584655 GJB4Q9NTQ9 266 aa12.31□□□□□ -0.44
RFFL-212ENST00000584655 RAI14Q9P0K7 980 aa12.31□□□□□ -0.44
RFFL-212ENST00000584655 LRP2BPQ9P2M1 347 aa12.31□□□□□ -0.44
RFFL-212ENST00000584655 EYA2O00167 538 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 ZPR1O75312 459 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 NBPF5PQ86XG9 351 aaPredicted RBP12.3□□□□□ -0.44
RFFL-212ENST00000584655 CMTR1Q8N1G2 835 aaKnown RBP12.3□□□□□ -0.44
RFFL-212ENST00000584655 PAG1Q9NWQ8 432 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 CYP46A1Q9Y6A2 500 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 HOXB7P09629 217 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 CYP19A1P11511 503 aaPredicted RBP12.3□□□□□ -0.44
RFFL-212ENST00000584655 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 hCG_1642624A0A1W2PR95 340 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 JAK2O60674 1132 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 CREB3L3Q68CJ9 461 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 EVI5LQ96CN4 794 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 HDAC5Q9UQL6 1122 aa12.3□□□□□ -0.44
RFFL-212ENST00000584655 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
RFFL-212ENST00000584655 SMIM22K7EJ46 135 aa12.29□□□□□ -0.44
RFFL-212ENST00000584655 FOXO4P98177 505 aa12.29□□□□□ -0.44
RFFL-212ENST00000584655 AMIGO3Q86WK7 504 aa12.29□□□□□ -0.44
RFFL-212ENST00000584655 CAMK4Q16566 473 aa12.29□□□□□ -0.44
RFFL-212ENST00000584655 NSFL1CQ9UNZ2 370 aaKnown RBP12.29□□□□□ -0.44
RFFL-212ENST00000584655 APOBRQ0VD83 1088 aa12.29□□□□□ -0.44
RFFL-212ENST00000584655 ERFEQ4G0M1 354 aa12.29□□□□□ -0.44
RFFL-212ENST00000584655 CCDC87Q9NVE4 849 aa12.29□□□□□ -0.44
RFFL-212ENST00000584655 NFAT5O94916 1531 aa12.29□□□□□ -0.44
RFFL-212ENST00000584655 ANKIB1Q9P2G1 1089 aa12.28□□□□□ -0.44
RFFL-212ENST00000584655 NAP1L5Q96NT1 182 aaPredicted RBP12.28□□□□□ -0.44
RFFL-212ENST00000584655 NWD1Q149M9 1564 aa12.28□□□□□ -0.44
RFFL-212ENST00000584655 AK9Q5TCS8 1911 aa12.28□□□□□ -0.44
RFFL-212ENST00000584655 A0A087WWV3 80 aa12.28□□□□□ -0.44
RFFL-212ENST00000584655 GOLGA6L3A6NEY3 463 aa12.28□□□□□ -0.44
RFFL-212ENST00000584655 BAG4O95429 457 aaKnown RBP12.28□□□□□ -0.44
RFFL-212ENST00000584655 RFC4P35249 363 aa12.28□□□□□ -0.44
RFFL-212ENST00000584655 OLFM4Q6UX06 510 aa12.28□□□□□ -0.44
RFFL-212ENST00000584655 FAM196AQ6ZSG2 479 aa12.28□□□□□ -0.44
RFFL-212ENST00000584655 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
RFFL-212ENST00000584655 RGPD5Q99666 1765 aa12.28□□□□□ -0.44
RFFL-212ENST00000584655 RIMBP2O15034 1052 aa12.27□□□□□ -0.44
RFFL-212ENST00000584655 ERCC4Q92889 916 aaPredicted RBP12.27□□□□□ -0.44
RFFL-212ENST00000584655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.27□□□□□ -0.44
RFFL-212ENST00000584655 AKAP12Q02952 1782 aa12.27□□□□□ -0.44
RFFL-212ENST00000584655 H3BQV1 296 aa12.27□□□□□ -0.44
RFFL-212ENST00000584655 IFFO2Q5TF58 517 aa12.27□□□□□ -0.44
RFFL-212ENST00000584655 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.44
RFFL-212ENST00000584655 CNPY2Q9Y2B0 182 aa12.27□□□□□ -0.44
RFFL-212ENST00000584655 LTN1O94822 1766 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms