RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.57
NUP85-217ENST00000581335 ZNF34Q8IZ26 560 aa11.52□□□□□ -0.57
NUP85-217ENST00000581335 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
NUP85-217ENST00000581335 BABAM1Q9NWV8 329 aa11.52□□□□□ -0.57
NUP85-217ENST00000581335 UBN2Q6ZU65 1347 aa11.52□□□□□ -0.57
NUP85-217ENST00000581335 ABCC12Q96J65 1359 aa11.52□□□□□ -0.57
NUP85-217ENST00000581335 IBTKQ9P2D0 1353 aaPredicted RBP11.52□□□□□ -0.57
NUP85-217ENST00000581335 GPTP24298 496 aa11.51□□□□□ -0.57
NUP85-217ENST00000581335 HOXA10P31260 410 aaPredicted RBP11.51□□□□□ -0.57
NUP85-217ENST00000581335 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
NUP85-217ENST00000581335 CC2D2BQ6DHV5 1058 aa11.51□□□□□ -0.57
NUP85-217ENST00000581335 PSMD1Q99460 953 aa11.51□□□□□ -0.57
NUP85-217ENST00000581335 TAF1DQ9H5J8 278 aaPredicted RBP11.51□□□□□ -0.57
NUP85-217ENST00000581335 RIC1Q4ADV7 1423 aa11.51□□□□□ -0.57
NUP85-217ENST00000581335 FZD9O00144 591 aa11.5□□□□□ -0.57
NUP85-217ENST00000581335 EIF2S2P20042 333 aaKnown RBP11.5□□□□□ -0.57
NUP85-217ENST00000581335 TMPOP42166 694 aaKnown RBP11.5□□□□□ -0.57
NUP85-217ENST00000581335 LMOD3Q0VAK6 560 aa11.5□□□□□ -0.57
NUP85-217ENST00000581335 PDIA6Q15084 440 aa11.5□□□□□ -0.57
NUP85-217ENST00000581335 LRP10Q7Z4F1 713 aa11.5□□□□□ -0.57
NUP85-217ENST00000581335 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
NUP85-217ENST00000581335 LDHDQ86WU2 507 aa11.5□□□□□ -0.57
NUP85-217ENST00000581335 RPGRQ92834 1020 aaKnown RBP11.5□□□□□ -0.57
NUP85-217ENST00000581335 MS4A3Q96HJ5 214 aa11.5□□□□□ -0.57
NUP85-217ENST00000581335 ZNF541Q9H0D2 1346 aa11.5□□□□□ -0.57
NUP85-217ENST00000581335 SNED1Q8TER0 1413 aa11.5□□□□□ -0.57
NUP85-217ENST00000581335 NTSR2O95665 410 aa11.49□□□□□ -0.57
NUP85-217ENST00000581335 GRIPAP1Q4V328 841 aa11.49□□□□□ -0.57
NUP85-217ENST00000581335 PARP10Q53GL7 1025 aa11.49□□□□□ -0.57
NUP85-217ENST00000581335 COL13A1Q5TAT6 717 aaPredicted RBP11.49□□□□□ -0.57
NUP85-217ENST00000581335 JDP2Q8WYK2 163 aa11.49□□□□□ -0.57
NUP85-217ENST00000581335 RBM17Q96I25 401 aaKnown RBP11.49□□□□□ -0.57
NUP85-217ENST00000581335 CRAMP1Q96RY5 1269 aa11.49□□□□□ -0.57
NUP85-217ENST00000581335 HACL1Q9UJ83 578 aa11.49□□□□□ -0.57
NUP85-217ENST00000581335 SMYD5Q6GMV2 418 aa11.48□□□□□ -0.57
NUP85-217ENST00000581335 GPC2Q8N158 579 aa11.48□□□□□ -0.57
NUP85-217ENST00000581335 NLRP3Q96P20 1036 aa11.48□□□□□ -0.57
NUP85-217ENST00000581335 PASKQ96RG2 1323 aa11.48□□□□□ -0.57
NUP85-217ENST00000581335 ANKRD36CQ5JPF3 1778 aa11.48□□□□□ -0.57
NUP85-217ENST00000581335 ADAMTSL1Q8N6G6 1762 aa11.48□□□□□ -0.57
NUP85-217ENST00000581335 PCNTO95613 3336 aa11.47□□□□□ -0.57
NUP85-217ENST00000581335 MYBBP1AQ9BQG0 1328 aaKnown RBP11.47□□□□□ -0.57
NUP85-217ENST00000581335 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
NUP85-217ENST00000581335 ANXA1P04083 346 aa11.47□□□□□ -0.57
NUP85-217ENST00000581335 HSPA1AP0DMV8 641 aaKnown RBP11.47□□□□□ -0.57
NUP85-217ENST00000581335 HSPA1BP0DMV9 641 aaKnown RBP11.47□□□□□ -0.57
NUP85-217ENST00000581335 EPHX2P34913 555 aa11.47□□□□□ -0.57
NUP85-217ENST00000581335 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
NUP85-217ENST00000581335 NEUROD2Q15784 382 aa11.47□□□□□ -0.57
NUP85-217ENST00000581335 PROSER3Q2NL68 480 aa11.47□□□□□ -0.57
NUP85-217ENST00000581335 EAPPQ56P03 285 aaPredicted RBP11.47□□□□□ -0.57
NUP85-217ENST00000581335 SLC10A5Q5PT55 438 aa11.47□□□□□ -0.57
NUP85-217ENST00000581335 PNMA8AQ86V59 439 aaPredicted RBP11.47□□□□□ -0.57
NUP85-217ENST00000581335 UTP14AQ9BVJ6 771 aaKnown RBP11.47□□□□□ -0.57
NUP85-217ENST00000581335 RNF123Q5XPI4 1314 aa11.46□□□□□ -0.57
NUP85-217ENST00000581335 CHL1O00533 1208 aa11.46□□□□□ -0.57
NUP85-217ENST00000581335 ITGBL1O95965 494 aaPredicted RBP11.46□□□□□ -0.57
NUP85-217ENST00000581335 EIF6P56537 245 aaKnown RBP11.46□□□□□ -0.57
NUP85-217ENST00000581335 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.57
NUP85-217ENST00000581335 COPS6Q7L5N1 327 aa11.46□□□□□ -0.57
NUP85-217ENST00000581335 CCDC146Q8IYE0 955 aa11.46□□□□□ -0.57
NUP85-217ENST00000581335 NECTIN2Q92692 538 aa11.46□□□□□ -0.57
NUP85-217ENST00000581335 RUNDC1Q96C34 613 aa11.46□□□□□ -0.57
NUP85-217ENST00000581335 MKRN1Q9UHC7 482 aaKnown RBP11.46□□□□□ -0.57
NUP85-217ENST00000581335 LAMB2P55268 1798 aa11.46□□□□□ -0.58
NUP85-217ENST00000581335 COL4A5P29400 1685 aa11.46□□□□□ -0.58
NUP85-217ENST00000581335 TCERG1O14776 1098 aaKnown RBP11.45□□□□□ -0.58
NUP85-217ENST00000581335 AIMP1Q12904 312 aaKnown RBP11.45□□□□□ -0.58
NUP85-217ENST00000581335 HSP90AB3PQ58FF7 597 aa11.45□□□□□ -0.58
NUP85-217ENST00000581335 LARGE2Q8N3Y3 721 aa11.45□□□□□ -0.58
NUP85-217ENST00000581335 TMX4Q9H1E5 349 aaPredicted RBP11.45□□□□□ -0.58
NUP85-217ENST00000581335 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
NUP85-217ENST00000581335 GJA3Q9Y6H8 435 aa11.45□□□□□ -0.58
NUP85-217ENST00000581335 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 TMEM88BA6NKF7 163 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 TCIRG1Q13488 830 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 SLC51AQ86UW1 340 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 NLRP10Q86W26 655 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 CNTROBQ8N137 903 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 XAGE3Q8WTP9 111 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 VPS33BQ9H267 617 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
NUP85-217ENST00000581335 ATP6V0A2Q9Y487 856 aa11.44□□□□□ -0.58
NUP85-217ENST00000581335 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
NUP85-217ENST00000581335 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
NUP85-217ENST00000581335 CNTNAP1P78357 1384 aa11.43□□□□□ -0.58
NUP85-217ENST00000581335 ABCC4O15439 1325 aa11.43□□□□□ -0.58
NUP85-217ENST00000581335 BBOX1O75936 387 aa11.43□□□□□ -0.58
NUP85-217ENST00000581335 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
NUP85-217ENST00000581335 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.58
NUP85-217ENST00000581335 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
NUP85-217ENST00000581335 MAP1SQ66K74 1059 aaPredicted RBP11.43□□□□□ -0.58
NUP85-217ENST00000581335 TNS4Q8IZW8 715 aa11.43□□□□□ -0.58
NUP85-217ENST00000581335 GPHNQ9NQX3 736 aaPredicted RBP11.43□□□□□ -0.58
NUP85-217ENST00000581335 ADAMTS8Q9UP79 889 aa11.43□□□□□ -0.58
NUP85-217ENST00000581335 PPIP5K2O43314 1243 aa11.42□□□□□ -0.58
NUP85-217ENST00000581335 TIE1P35590 1138 aa11.42□□□□□ -0.58
NUP85-217ENST00000581335 MLLT3P42568 568 aaPredicted RBP11.42□□□□□ -0.58
NUP85-217ENST00000581335 MKRN3Q13064 507 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 330.6 ms