RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 LMCD1Q9NZU5 365 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 PYCARDQ9ULZ3 195 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 SYNPO2Q9UMS6 1093 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 KNDC1Q76NI1 1749 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 RPGRIP1LQ68CZ1 1315 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 SETBP1Q9Y6X0 1596 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 SDSP20132 328 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 MNAT1P51948 309 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 NEK4P51957 841 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 ST5P78524 1137 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 RBBP5Q15291 538 aaKnown RBP8.74□□□□□ -1.01
DDX42-207ENST00000578593 LEKR1Q6ZMV7 388 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 CRACR2AQ9BSW2 395 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 KCNF1Q9H3M0 494 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 ZSCAN16Q9H4T2 348 aaPredicted RBP8.74□□□□□ -1.01
DDX42-207ENST00000578593 TRAK1Q9UPV9 953 aa8.74□□□□□ -1.01
DDX42-207ENST00000578593 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 PTPRCP08575 1304 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 EFCAB6Q5THR3 1501 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 SMTNL1A8MU46 457 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 SGSM2O43147 1006 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 FCHSD2O94868 740 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 SNUPNO95149 360 aaKnown RBP8.73□□□□□ -1.01
DDX42-207ENST00000578593 ELF1P32519 619 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 CCDC178Q5BJE1 867 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 MICAL1Q8TDZ2 1067 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 GTF3C6Q969F1 213 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 SRRTQ9BXP5 876 aaKnown RBP8.73□□□□□ -1.01
DDX42-207ENST00000578593 ANKRD36BQ8N2N9 1353 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 PIK3R4Q99570 1358 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 ADGRB3O60242 1522 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 GCFC2P16383 781 aaKnown RBP8.73□□□□□ -1.01
DDX42-207ENST00000578593 PUS10Q3MIT2 529 aaKnown RBP8.73□□□□□ -1.01
DDX42-207ENST00000578593 CCDC30Q5VVM6 783 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 FBXO38Q6PIJ6 1188 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 USP48Q86UV5 1035 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 ARMC2Q8NEN0 867 aa8.73□□□□□ -1.01
DDX42-207ENST00000578593 SNRNP27Q8WVK2 155 aaKnown RBP8.73□□□□□ -1.01
DDX42-207ENST00000578593 TMX4Q9H1E5 349 aaPredicted RBP8.73□□□□□ -1.01
DDX42-207ENST00000578593 CWC25Q9NXE8 425 aaPredicted RBP8.73□□□□□ -1.01
DDX42-207ENST00000578593 ATP7AQ04656 1500 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 PTCH1Q13635 1447 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 CORO7P57737 925 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 PDIA5Q14554 519 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 SLFNL1Q499Z3 407 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 NOL8Q76FK4 1167 aaKnown RBP8.72□□□□□ -1.01
DDX42-207ENST00000578593 RBM12BQ8IXT5 1001 aaKnown RBP8.72□□□□□ -1.01
DDX42-207ENST00000578593 MRPL50Q8N5N7 158 aaKnown RBP8.72□□□□□ -1.01
DDX42-207ENST00000578593 AGAP3Q96P47 875 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 PLEKHG4BQ96PX9 1271 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 BAG1Q99933 345 aaPredicted RBP8.72□□□□□ -1.01
DDX42-207ENST00000578593 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
DDX42-207ENST00000578593 ARHGEF28Q8N1W1 1705 aaKnown RBP8.72□□□□□ -1.01
DDX42-207ENST00000578593 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 YEATS2Q9ULM3 1422 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 ELL2O00472 640 aaPredicted RBP8.72□□□□□ -1.01
DDX42-207ENST00000578593 PYGLP06737 847 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 TPM4P67936 248 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 SNX1Q13596 522 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 DCTPP1Q9H773 170 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 ABCC4O15439 1325 aa8.72□□□□□ -1.01
DDX42-207ENST00000578593 TMCO5BA8MYB1 307 aa8.71□□□□□ -1.01
DDX42-207ENST00000578593 MCM6Q14566 821 aa8.71□□□□□ -1.01
DDX42-207ENST00000578593 C16orf87Q6PH81 154 aa8.71□□□□□ -1.01
DDX42-207ENST00000578593 TSPYL6Q8N831 410 aa8.71□□□□□ -1.01
DDX42-207ENST00000578593 TDRD7Q8NHU6 1098 aaKnown RBP8.71□□□□□ -1.01
DDX42-207ENST00000578593 TULP4Q9NRJ4 1543 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 APBB1O00213 710 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 AP5Z1O43299 807 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 VAMP4O75379 141 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 LRRC31Q6UY01 552 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 PIAS4Q8N2W9 510 aaPredicted RBP8.71□□□□□ -1.02
DDX42-207ENST00000578593 OGFOD1Q8N543 542 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 AFAP1Q8N556 730 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 ARL10Q8N8L6 244 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 ARHGAP45Q92619 1136 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 IQCGQ9H095 443 aaKnown RBP8.71□□□□□ -1.02
DDX42-207ENST00000578593 FHOD1Q9Y613 1164 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 SYNRGQ9UMZ2 1314 aa8.71□□□□□ -1.02
DDX42-207ENST00000578593 COL3A1P02461 1466 aaPredicted RBP8.71□□□□□ -1.02
DDX42-207ENST00000578593 ZSCAN9O15535 394 aaPredicted RBP8.7□□□□□ -1.02
DDX42-207ENST00000578593 PLA2G4AP47712 749 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 IFT88Q13099 833 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 CCDC183Q5T5S1 534 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 GBP6Q6ZN66 633 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 SPC24Q8NBT2 197 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 A1CFQ9NQ94 594 aaKnown RBP8.7□□□□□ -1.02
DDX42-207ENST00000578593 IPO5O00410 1097 aaKnown RBP8.7□□□□□ -1.02
DDX42-207ENST00000578593 ERC2O15083 957 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 RTN2O75298 545 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 PECAM1P16284 738 aaPredicted RBP8.7□□□□□ -1.02
DDX42-207ENST00000578593 CUL4AQ13619 759 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 CRYMQ14894 314 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 CCDC34Q96HJ3 373 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 STK24Q9Y6E0 443 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 V9GYY5 206 aaPredicted RBP8.7□□□□□ -1.02
DDX42-207ENST00000578593 ARAP3Q8WWN8 1544 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 NSD2O96028 1365 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 NEDD9Q14511 834 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 CTCFLQ8NI51 663 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms