RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 ANKRD24Q8TF21 1146 aa17.45■□□□□ 0.38
CUEDC1-206ENST00000577830 BRF1Q92994 677 aa17.45■□□□□ 0.38
CUEDC1-206ENST00000577830 GIGYF1O75420 1035 aaPredicted RBP17.44■□□□□ 0.38
CUEDC1-206ENST00000577830 HOMEZQ8IX15 550 aa17.44■□□□□ 0.38
CUEDC1-206ENST00000577830 PPP4R3BQ5MIZ7 849 aa17.44■□□□□ 0.38
CUEDC1-206ENST00000577830 GCP02774 474 aa17.44■□□□□ 0.38
CUEDC1-206ENST00000577830 NECTIN1Q15223 517 aa17.43■□□□□ 0.38
CUEDC1-206ENST00000577830 AKAP4Q5JQC9 854 aa17.43■□□□□ 0.38
CUEDC1-206ENST00000577830 EPHA10Q5JZY3 1008 aa17.43■□□□□ 0.38
CUEDC1-206ENST00000577830 FILIP1Q7Z7B0 1213 aa17.43■□□□□ 0.38
CUEDC1-206ENST00000577830 NR1I2O75469 434 aa17.43■□□□□ 0.38
CUEDC1-206ENST00000577830 NFATC2IPQ8NCF5 419 aa17.43■□□□□ 0.38
CUEDC1-206ENST00000577830 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
CUEDC1-206ENST00000577830 AKAP12Q02952 1782 aa17.43■□□□□ 0.38
CUEDC1-206ENST00000577830 TFCP2Q12800 502 aa17.42■□□□□ 0.38
CUEDC1-206ENST00000577830 Q6ZUG5 572 aa17.42■□□□□ 0.38
CUEDC1-206ENST00000577830 MYRIPQ8NFW9 859 aa17.42■□□□□ 0.38
CUEDC1-206ENST00000577830 MAP7D2Q96T17 732 aa17.42■□□□□ 0.38
CUEDC1-206ENST00000577830 RIOK3O14730 519 aaKnown RBP17.42■□□□□ 0.38
CUEDC1-206ENST00000577830 KRT28Q7Z3Y7 464 aa17.42■□□□□ 0.38
CUEDC1-206ENST00000577830 GOLGA6L19H0YKK7 550 aa17.41■□□□□ 0.38
CUEDC1-206ENST00000577830 PDCP20941 246 aa17.41■□□□□ 0.38
CUEDC1-206ENST00000577830 ZNF165P49910 485 aa17.41■□□□□ 0.38
CUEDC1-206ENST00000577830 KCNF1Q9H3M0 494 aa17.41■□□□□ 0.38
CUEDC1-206ENST00000577830 CBX8Q9HC52 389 aa17.41■□□□□ 0.38
CUEDC1-206ENST00000577830 NCOA5Q9HCD5 579 aaKnown RBP17.41■□□□□ 0.38
CUEDC1-206ENST00000577830 LINS1Q8NG48 757 aa17.41■□□□□ 0.38
CUEDC1-206ENST00000577830 FAM200AQ8TCP9 573 aa17.41■□□□□ 0.38
CUEDC1-206ENST00000577830 BECN2A8MW95 431 aa17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 TAF7LQ5H9L4 462 aa17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 HMGN5P82970 282 aaKnown RBP17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 TPD52L1Q16890 204 aaPredicted RBP17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 TRMT1Q9NXH9 659 aaKnown RBP17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 V9GYY5 206 aaPredicted RBP17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 RPS6KB1P23443 525 aa17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 MAP4K1Q92918 833 aa17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 MRVI1Q9Y6F6 885 aa17.4■□□□□ 0.38
CUEDC1-206ENST00000577830 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.38
CUEDC1-206ENST00000577830 GOLIM4O00461 696 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 TERF1P54274 439 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 CHRNA2Q15822 529 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 AXIN2Q9Y2T1 843 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 TTC5Q8N0Z6 440 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 TMEM87AQ8NBN3 555 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 BCL2L12Q9HB09 334 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 SNRKQ9NRH2 765 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 SYTL4Q96C24 671 aaPredicted RBP17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 KAZALD1Q96I82 304 aa17.39■□□□□ 0.37
CUEDC1-206ENST00000577830 A0A087WZG4 1122 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 NAA30Q147X3 362 aaPredicted RBP17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 ALDH1L1O75891 902 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 HAND2P61296 217 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 TIMM10P62072 90 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 OTUD7BQ6GQQ9 843 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 ISM2Q6H9L7 571 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 CLIP2Q9UDT6 1046 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 HIP1O00291 1037 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 IGKV5-2P06315 115 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 ME1P48163 572 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 STK11IPQ8N1F8 1099 aa17.38■□□□□ 0.37
CUEDC1-206ENST00000577830 ATF3P18847 181 aa17.37■□□□□ 0.37
CUEDC1-206ENST00000577830 TOB2Q14106 344 aaPredicted RBP17.37■□□□□ 0.37
CUEDC1-206ENST00000577830 ARID5BQ14865 1188 aa17.37■□□□□ 0.37
CUEDC1-206ENST00000577830 ZRSR1Q15695 479 aaKnown RBP17.37■□□□□ 0.37
CUEDC1-206ENST00000577830 PDCL2Q8N4E4 241 aa17.37■□□□□ 0.37
CUEDC1-206ENST00000577830 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
CUEDC1-206ENST00000577830 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
CUEDC1-206ENST00000577830 U2AF2P26368 475 aaKnown RBP eCLIP17.36■□□□□ 0.37
CUEDC1-206ENST00000577830 ANKRD1Q15327 319 aa17.36■□□□□ 0.37
CUEDC1-206ENST00000577830 DBNLQ9UJU6 430 aaKnown RBP17.36■□□□□ 0.37
CUEDC1-206ENST00000577830 A0A0G2JLW4 131 aa17.36■□□□□ 0.37
CUEDC1-206ENST00000577830 FKBP4Q02790 459 aaKnown RBP eCLIP17.36■□□□□ 0.37
CUEDC1-206ENST00000577830 SF3A1Q15459 793 aaKnown RBP17.36■□□□□ 0.37
CUEDC1-206ENST00000577830 ANKARQ7Z5J8 1434 aa17.36■□□□□ 0.37
CUEDC1-206ENST00000577830 BIN1O00499 593 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 GORABQ5T7V8 394 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 ZNF710Q8N1W2 664 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 KCNH5Q8NCM2 988 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 KIAA1524Q8TCG1 905 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 TNNT1P13805 278 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 ANKRD13DQ6ZTN6 518 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 ZNF496Q96IT1 587 aaPredicted RBP17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 PRIMPOLQ96LW4 560 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 LMBR1LQ6UX01 489 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 TM6SF1Q9BZW5 370 aa17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
CUEDC1-206ENST00000577830 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 TAF5LO75529 589 aa17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 AMOTQ4VCS5 1084 aa17.34■□□□□ 0.37
CUEDC1-206ENST00000577830 PGBD1Q96JS3 809 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms