RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 PHF14O94880 888 aa17.59■□□□□ 0.41
PRPF8-216ENST00000577001 NECTIN1Q15223 517 aa17.59■□□□□ 0.41
PRPF8-216ENST00000577001 CCDC186Q7Z3E2 898 aa17.59■□□□□ 0.41
PRPF8-216ENST00000577001 SYNE4Q8N205 404 aa17.59■□□□□ 0.41
PRPF8-216ENST00000577001 BIN1O00499 593 aa17.59■□□□□ 0.41
PRPF8-216ENST00000577001 ZNF790Q6PG37 636 aa17.59■□□□□ 0.41
PRPF8-216ENST00000577001 ZHX1Q9UKY1 873 aaPredicted RBP17.59■□□□□ 0.41
PRPF8-216ENST00000577001 C3P01024 1663 aa17.59■□□□□ 0.41
PRPF8-216ENST00000577001 HSP90AB4PQ58FF6 505 aa17.58■□□□□ 0.41
PRPF8-216ENST00000577001 HSP90AA4PQ58FG1 418 aa17.58■□□□□ 0.41
PRPF8-216ENST00000577001 TTLL7Q6ZT98 887 aa17.58■□□□□ 0.41
PRPF8-216ENST00000577001 FILIP1Q7Z7B0 1213 aa17.58■□□□□ 0.41
PRPF8-216ENST00000577001 PUS3Q9BZE2 481 aaKnown RBP17.58■□□□□ 0.41
PRPF8-216ENST00000577001 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.4
PRPF8-216ENST00000577001 POLR3DP05423 398 aaPredicted RBP17.58■□□□□ 0.4
PRPF8-216ENST00000577001 ANKRD13DQ6ZTN6 518 aa17.58■□□□□ 0.4
PRPF8-216ENST00000577001 CCDC144CPQ8IYA2 1237 aa17.58■□□□□ 0.4
PRPF8-216ENST00000577001 NUP62CLQ9H1M0 184 aa17.58■□□□□ 0.4
PRPF8-216ENST00000577001 STRN4Q9NRL3 753 aa17.58■□□□□ 0.4
PRPF8-216ENST00000577001 TRMT1Q9NXH9 659 aaKnown RBP17.58■□□□□ 0.4
PRPF8-216ENST00000577001 ITSN1Q15811 1721 aa17.58■□□□□ 0.4
PRPF8-216ENST00000577001 KRT85P78386 507 aa17.57■□□□□ 0.4
PRPF8-216ENST00000577001 TOB2Q14106 344 aaPredicted RBP17.57■□□□□ 0.4
PRPF8-216ENST00000577001 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
PRPF8-216ENST00000577001 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
PRPF8-216ENST00000577001 DDX58O95786 925 aaKnown RBP17.57■□□□□ 0.4
PRPF8-216ENST00000577001 LRRC24Q50LG9 513 aa17.57■□□□□ 0.4
PRPF8-216ENST00000577001 NRKQ7Z2Y5 1582 aa17.56■□□□□ 0.4
PRPF8-216ENST00000577001 NEURL1BA8MQ27 555 aa17.56■□□□□ 0.4
PRPF8-216ENST00000577001 ANKLE2Q86XL3 938 aa17.56■□□□□ 0.4
PRPF8-216ENST00000577001 KCNF1Q9H3M0 494 aa17.56■□□□□ 0.4
PRPF8-216ENST00000577001 SSH2Q76I76 1423 aa17.56■□□□□ 0.4
PRPF8-216ENST00000577001 PDIA6Q15084 440 aa17.56■□□□□ 0.4
PRPF8-216ENST00000577001 WASHC4Q2M389 1173 aa17.56■□□□□ 0.4
PRPF8-216ENST00000577001 TYRO3Q06418 890 aa17.55■□□□□ 0.4
PRPF8-216ENST00000577001 GCKRQ14397 625 aa17.55■□□□□ 0.4
PRPF8-216ENST00000577001 SRCAPQ6ZRS2 3230 aa17.55■□□□□ 0.4
PRPF8-216ENST00000577001 ZNF500O60304 480 aaPredicted RBP17.55■□□□□ 0.4
PRPF8-216ENST00000577001 DENND2AQ9ULE3 1009 aa17.55■□□□□ 0.4
PRPF8-216ENST00000577001 CYP21A2P08686 494 aa17.55■□□□□ 0.4
PRPF8-216ENST00000577001 GORABQ5T7V8 394 aa17.54■□□□□ 0.4
PRPF8-216ENST00000577001 CCDC82Q8N4S0 544 aa17.54■□□□□ 0.4
PRPF8-216ENST00000577001 FER1L4A9Z1Z3 1794 aa17.54■□□□□ 0.4
PRPF8-216ENST00000577001 GPTP24298 496 aa17.54■□□□□ 0.4
PRPF8-216ENST00000577001 MAP3K11Q16584 847 aa17.54■□□□□ 0.4
PRPF8-216ENST00000577001 MAP4K1Q92918 833 aa17.54■□□□□ 0.4
PRPF8-216ENST00000577001 PKNOX2Q96KN3 472 aa17.54■□□□□ 0.4
PRPF8-216ENST00000577001 TECPR2O15040 1411 aa17.54■□□□□ 0.4
PRPF8-216ENST00000577001 SNAP23O00161 211 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 DDX21Q9NR30 783 aaKnown RBP eCLIP17.53■□□□□ 0.4
PRPF8-216ENST00000577001 STOX1Q6ZVD7 989 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 ARHGEF25Q86VW2 580 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 PGBD1Q96JS3 809 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 NEK1Q96PY6 1258 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 CBX8Q9HC52 389 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 ATP6V1DQ9Y5K8 247 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 TAF5LO75529 589 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 CCDC192P0DO97 292 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 RPS6KB1P23443 525 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 CABP4P57796 275 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 SASS6Q6UVJ0 657 aa17.53■□□□□ 0.4
PRPF8-216ENST00000577001 MON2Q7Z3U7 1717 aa17.52■□□□□ 0.4
PRPF8-216ENST00000577001 COL15A1P39059 1388 aa17.52■□□□□ 0.4
PRPF8-216ENST00000577001 TNNI3KQ59H18 835 aa17.52■□□□□ 0.4
PRPF8-216ENST00000577001 INCENPQ9NQS7 918 aa17.52■□□□□ 0.4
PRPF8-216ENST00000577001 MRVI1Q9Y6F6 885 aa17.52■□□□□ 0.4
PRPF8-216ENST00000577001 FPGT-TNNI3KV9GXZ4 949 aa17.52■□□□□ 0.4
PRPF8-216ENST00000577001 LEO1Q8WVC0 666 aaPredicted RBP17.52■□□□□ 0.39
PRPF8-216ENST00000577001 PDCL3Q9H2J4 239 aa17.52■□□□□ 0.39
PRPF8-216ENST00000577001 TTC41PQ6P2S7 1318 aa17.51■□□□□ 0.39
PRPF8-216ENST00000577001 TMX1Q9H3N1 280 aa17.51■□□□□ 0.39
PRPF8-216ENST00000577001 ME1P48163 572 aa17.51■□□□□ 0.39
PRPF8-216ENST00000577001 PTPN12Q05209 780 aaKnown RBP17.51■□□□□ 0.39
PRPF8-216ENST00000577001 SCRN1Q12765 414 aa17.51■□□□□ 0.39
PRPF8-216ENST00000577001 RNF20Q5VTR2 975 aa17.51■□□□□ 0.39
PRPF8-216ENST00000577001 TATP17735 454 aaPredicted RBP17.5■□□□□ 0.39
PRPF8-216ENST00000577001 ATP2B1P20020 1258 aa17.5■□□□□ 0.39
PRPF8-216ENST00000577001 RIOK3O14730 519 aaKnown RBP17.5■□□□□ 0.39
PRPF8-216ENST00000577001 ZNF165P49910 485 aa17.5■□□□□ 0.39
PRPF8-216ENST00000577001 HELBQ8NG08 1087 aaPredicted RBP17.5■□□□□ 0.39
PRPF8-216ENST00000577001 DIP2AQ14689 1571 aa17.5■□□□□ 0.39
PRPF8-216ENST00000577001 ERC1Q8IUD2 1116 aa17.5■□□□□ 0.39
PRPF8-216ENST00000577001 KCNH5Q8NCM2 988 aa17.5■□□□□ 0.39
PRPF8-216ENST00000577001 A0A1B0GVL5 298 aa17.49■□□□□ 0.39
PRPF8-216ENST00000577001 PSMA5P28066 241 aa17.49■□□□□ 0.39
PRPF8-216ENST00000577001 ADORA1P30542 326 aa17.49■□□□□ 0.39
PRPF8-216ENST00000577001 C11orf57Q6ZUT1 292 aaPredicted RBP17.49■□□□□ 0.39
PRPF8-216ENST00000577001 CYP27B1O15528 508 aa17.49■□□□□ 0.39
PRPF8-216ENST00000577001 APPP05067 770 aa17.49■□□□□ 0.39
PRPF8-216ENST00000577001 FAM89AQ96GI7 184 aa17.49■□□□□ 0.39
PRPF8-216ENST00000577001 ALDH1L1O75891 902 aa17.48■□□□□ 0.39
PRPF8-216ENST00000577001 PPP4R3BQ5MIZ7 849 aa17.48■□□□□ 0.39
PRPF8-216ENST00000577001 AIFM3Q96NN9 605 aa17.48■□□□□ 0.39
PRPF8-216ENST00000577001 HSPA2P54652 639 aa17.48■□□□□ 0.39
PRPF8-216ENST00000577001 CSPP1Q1MSJ5 1256 aa17.48■□□□□ 0.39
PRPF8-216ENST00000577001 UBE2Q2LH0YL09 131 aa17.48■□□□□ 0.39
PRPF8-216ENST00000577001 CCDC144BQ3MJ40 725 aa17.48■□□□□ 0.39
PRPF8-216ENST00000577001 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
PRPF8-216ENST00000577001 U2AF2P26368 475 aaKnown RBP eCLIP17.47■□□□□ 0.394e-10■■■■■ 29.1
PRPF8-216ENST00000577001 AMOTQ4VCS5 1084 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms