RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 LAMB1P07942 1786 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 PAPPA2Q9BXP8 1791 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 H7C1D1 291 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 BBOX1O75936 387 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 KIF6Q6ZMV9 814 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 SP8Q8IXZ3 490 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 C2orf69Q8N8R5 385 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 RNF186Q9NXI6 227 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
CHMP6-203ENST00000572525 ERBB4Q15303 1308 aa13.53□□□□□ -0.24
CHMP6-203ENST00000572525 KIAA0100Q14667 2235 aaKnown RBP13.53□□□□□ -0.24
CHMP6-203ENST00000572525 SLC10A3P09131 477 aa13.52□□□□□ -0.25
CHMP6-203ENST00000572525 KIF23Q02241 960 aaPredicted RBP13.52□□□□□ -0.25
CHMP6-203ENST00000572525 TAF7Q15545 349 aaPredicted RBP13.52□□□□□ -0.25
CHMP6-203ENST00000572525 NOM1Q5C9Z4 860 aaKnown RBP13.52□□□□□ -0.25
CHMP6-203ENST00000572525 SUSD4Q5VX71 490 aa13.52□□□□□ -0.25
CHMP6-203ENST00000572525 DPP8Q6V1X1 898 aaPredicted RBP13.52□□□□□ -0.25
CHMP6-203ENST00000572525 GIGYF2Q6Y7W6 1299 aaKnown RBP13.52□□□□□ -0.25
CHMP6-203ENST00000572525 TMC4Q7Z404 712 aa13.52□□□□□ -0.25
CHMP6-203ENST00000572525 ABCC4O15439 1325 aa13.52□□□□□ -0.25
CHMP6-203ENST00000572525 ZNF609O15014 1411 aa13.52□□□□□ -0.25
CHMP6-203ENST00000572525 SCN9AQ15858 1988 aa13.52□□□□□ -0.25
CHMP6-203ENST00000572525 TRPA1O75762 1119 aa13.51□□□□□ -0.25
CHMP6-203ENST00000572525 RPS12P25398 132 aaKnown RBP13.51□□□□□ -0.25
CHMP6-203ENST00000572525 TRIM26Q12899 539 aaPredicted RBP13.51□□□□□ -0.25
CHMP6-203ENST00000572525 KRT26Q7Z3Y9 468 aa13.51□□□□□ -0.25
CHMP6-203ENST00000572525 MPNDQ8N594 471 aa13.51□□□□□ -0.25
CHMP6-203ENST00000572525 ZNF157P51786 506 aaPredicted RBP13.5□□□□□ -0.25
CHMP6-203ENST00000572525 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
CHMP6-203ENST00000572525 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
CHMP6-203ENST00000572525 PNISRQ8TF01 805 aaKnown RBP13.5□□□□□ -0.25
CHMP6-203ENST00000572525 CSRNP1Q96S65 589 aa13.5□□□□□ -0.25
CHMP6-203ENST00000572525 PCGF6Q9BYE7 350 aa13.5□□□□□ -0.25
CHMP6-203ENST00000572525 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
CHMP6-203ENST00000572525 CEP290O15078 2479 aa13.5□□□□□ -0.25
CHMP6-203ENST00000572525 CENPFP49454 3210 aa13.49□□□□□ -0.25
CHMP6-203ENST00000572525 YDJCA8MPS7 323 aa13.49□□□□□ -0.25
CHMP6-203ENST00000572525 RAD17O75943 681 aa13.49□□□□□ -0.25
CHMP6-203ENST00000572525 FKBP1BP68106 108 aa13.49□□□□□ -0.25
CHMP6-203ENST00000572525 TTLL7Q6ZT98 887 aa13.49□□□□□ -0.25
CHMP6-203ENST00000572525 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
CHMP6-203ENST00000572525 MCM10Q7L590 875 aa13.49□□□□□ -0.25
CHMP6-203ENST00000572525 GPTP24298 496 aa13.48□□□□□ -0.25
CHMP6-203ENST00000572525 CC2D1BQ5T0F9 858 aaKnown RBP13.48□□□□□ -0.25
CHMP6-203ENST00000572525 SLC51AQ86UW1 340 aa13.48□□□□□ -0.25
CHMP6-203ENST00000572525 DCPSQ96C86 337 aaKnown RBP13.48□□□□□ -0.25
CHMP6-203ENST00000572525 CFAP53Q96M91 514 aa13.48□□□□□ -0.25
CHMP6-203ENST00000572525 NUDCQ9Y266 331 aa13.48□□□□□ -0.25
CHMP6-203ENST00000572525 TCERG1O14776 1098 aaKnown RBP13.47□□□□□ -0.25
CHMP6-203ENST00000572525 UTP14AQ9BVJ6 771 aaKnown RBP13.47□□□□□ -0.25
CHMP6-203ENST00000572525 GRAPQ13588 217 aa13.46□□□□□ -0.25
CHMP6-203ENST00000572525 FBXO46Q6PJ61 603 aaPredicted RBP13.46□□□□□ -0.25
CHMP6-203ENST00000572525 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.25
CHMP6-203ENST00000572525 NECTIN2Q92692 538 aa13.46□□□□□ -0.25
CHMP6-203ENST00000572525 ZBTB3Q9H5J0 574 aa13.46□□□□□ -0.25
CHMP6-203ENST00000572525 SHTN1A0MZ66 631 aa13.45□□□□□ -0.26
CHMP6-203ENST00000572525 PSMD14O00487 310 aa13.45□□□□□ -0.26
CHMP6-203ENST00000572525 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
CHMP6-203ENST00000572525 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
CHMP6-203ENST00000572525 SAMD7Q7Z3H4 446 aa13.45□□□□□ -0.26
CHMP6-203ENST00000572525 RASAL3Q86YV0 1011 aa13.45□□□□□ -0.26
CHMP6-203ENST00000572525 CFHR5Q9BXR6 569 aa13.45□□□□□ -0.26
CHMP6-203ENST00000572525 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
CHMP6-203ENST00000572525 HABP4Q5JVS0 413 aaKnown RBP13.44□□□□□ -0.26
CHMP6-203ENST00000572525 LRP10Q7Z4F1 713 aa13.44□□□□□ -0.26
CHMP6-203ENST00000572525 SULF1Q8IWU6 871 aa13.44□□□□□ -0.26
CHMP6-203ENST00000572525 RRP7AQ9Y3A4 280 aaKnown RBP13.44□□□□□ -0.26
CHMP6-203ENST00000572525 PITPNM2Q9BZ72 1349 aa13.43□□□□□ -0.26
CHMP6-203ENST00000572525 DCTN1Q14203 1278 aa13.43□□□□□ -0.26
CHMP6-203ENST00000572525 WASHC4Q2M389 1173 aa13.43□□□□□ -0.26
CHMP6-203ENST00000572525 TBC1D10BQ4KMP7 808 aaPredicted RBP13.43□□□□□ -0.26
CHMP6-203ENST00000572525 NGEFQ8N5V2 710 aa13.43□□□□□ -0.26
CHMP6-203ENST00000572525 HDAC9Q9UKV0 1011 aa13.43□□□□□ -0.26
CHMP6-203ENST00000572525 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
CHMP6-203ENST00000572525 TRIOBPQ9H2D6 2365 aa13.42□□□□□ -0.26
CHMP6-203ENST00000572525 ZNF646O15015 1829 aaPredicted RBP13.42□□□□□ -0.26
CHMP6-203ENST00000572525 ADM5C9JUS6 153 aa13.42□□□□□ -0.26
CHMP6-203ENST00000572525 EGFRP00533 1210 aa13.42□□□□□ -0.26
CHMP6-203ENST00000572525 MYL6BP14649 208 aa13.42□□□□□ -0.26
CHMP6-203ENST00000572525 KIF4BQ2VIQ3 1234 aa13.42□□□□□ -0.26
CHMP6-203ENST00000572525 ZNF296Q8WUU4 475 aaPredicted RBP13.42□□□□□ -0.26
CHMP6-203ENST00000572525 CDCA5Q96FF9 252 aa13.42□□□□□ -0.26
CHMP6-203ENST00000572525 GGA3Q9NZ52 723 aa13.42□□□□□ -0.26
CHMP6-203ENST00000572525 BRCA2P51587 3418 aa13.42□□□□□ -0.26
CHMP6-203ENST00000572525 VIL1P09327 827 aaKnown RBP13.41□□□□□ -0.26
CHMP6-203ENST00000572525 U2AF1L5P0DN76 240 aaPredicted RBP13.41□□□□□ -0.26
CHMP6-203ENST00000572525 TM4SF4P48230 202 aa13.41□□□□□ -0.26
CHMP6-203ENST00000572525 U2AF1Q01081 240 aaKnown RBP eCLIP13.41□□□□□ -0.26
CHMP6-203ENST00000572525 DLK2Q6UY11 383 aa13.41□□□□□ -0.26
CHMP6-203ENST00000572525 EYA3Q99504 573 aa13.41□□□□□ -0.26
CHMP6-203ENST00000572525 RTL9Q8NET4 1388 aa13.41□□□□□ -0.26
CHMP6-203ENST00000572525 SH3TC1Q8TE82 1336 aa13.4□□□□□ -0.26
CHMP6-203ENST00000572525 ZNF280AP59817 542 aaPredicted RBP13.4□□□□□ -0.26
CHMP6-203ENST00000572525 INTS3Q68E01 1043 aaKnown RBP13.4□□□□□ -0.26
CHMP6-203ENST00000572525 NLRP10Q86W26 655 aa13.4□□□□□ -0.26
CHMP6-203ENST00000572525 ECM29Q5VYK3 1845 aa13.39□□□□□ -0.27
CHMP6-203ENST00000572525 CUL9Q8IWT3 2517 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms