RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 COL9A1P20849 921 aa8.5□□□□□ -1.05
PRPF8-204ENST00000572445 CHRNA5P30532 468 aa8.5□□□□□ -1.05
PRPF8-204ENST00000572445 HTRA3P83110 453 aa8.5□□□□□ -1.05
PRPF8-204ENST00000572445 SLC39A6Q13433 755 aa8.5□□□□□ -1.05
PRPF8-204ENST00000572445 CC2D1BQ5T0F9 858 aaKnown RBP8.5□□□□□ -1.05
PRPF8-204ENST00000572445 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
PRPF8-204ENST00000572445 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
PRPF8-204ENST00000572445 KCPQ6ZWJ8 1503 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 SBF1O95248 1867 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 WDR90Q96KV7 1748 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 TMEM88BA6NKF7 163 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 E9PSI1 815 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 GYS1P13807 737 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 HSPA6P17066 643 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 RASSF7Q02833 373 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 CTDSPL2Q05D32 466 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 DDR1Q08345 913 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 BICDL1Q6ZP65 573 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 SULF1Q8IWU6 871 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 DNAJC10Q8IXB1 793 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 NFATC2IPQ8NCF5 419 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 TSKSQ9UJT2 592 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 KNSTRNQ9Y448 316 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 ZNF831Q5JPB2 1677 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 CNTNAP4Q9C0A0 1308 aa8.49□□□□□ -1.05
PRPF8-204ENST00000572445 HSP90AB1P08238 724 aaKnown RBP8.48□□□□□ -1.05
PRPF8-204ENST00000572445 LMOD1P29536 600 aaPredicted RBP8.48□□□□□ -1.05
PRPF8-204ENST00000572445 CCDC27Q2M243 656 aa8.48□□□□□ -1.05
PRPF8-204ENST00000572445 C9orf131Q5VYM1 1079 aa8.48□□□□□ -1.05
PRPF8-204ENST00000572445 SND1Q7KZF4 910 aaKnown RBP eCLIP8.48□□□□□ -1.054e-7■□□□□ 9.8
PRPF8-204ENST00000572445 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
PRPF8-204ENST00000572445 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.05
PRPF8-204ENST00000572445 HLA-CQ95604 372 aa8.48□□□□□ -1.05
PRPF8-204ENST00000572445 ALG2Q9H553 416 aa8.48□□□□□ -1.05
PRPF8-204ENST00000572445 PCDHGC3Q9UN70 934 aa8.48□□□□□ -1.05
PRPF8-204ENST00000572445 ADAMTS7Q9UKP4 1686 aa8.48□□□□□ -1.05
PRPF8-204ENST00000572445 COL11A2P13942 1736 aaPredicted RBP8.48□□□□□ -1.05
PRPF8-204ENST00000572445 ERVV-2B6SEH9 535 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 U2SURPO15042 1029 aaKnown RBP8.47□□□□□ -1.05
PRPF8-204ENST00000572445 CANXP27824 592 aaKnown RBP8.47□□□□□ -1.05
PRPF8-204ENST00000572445 CLCN6P51797 869 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 GUCA2AQ02747 115 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 WASHC4Q2M389 1173 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 PRPF38BQ5VTL8 546 aaKnown RBP8.47□□□□□ -1.05
PRPF8-204ENST00000572445 USPL1Q5W0Q7 1092 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 NUDT18Q6ZVK8 323 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 EPS8L1Q8TE68 723 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 LRRN4Q8WUT4 740 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 TMEM134Q9H6X4 195 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 RNF181Q9P0P0 153 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 DLEC1Q9Y238 1755 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 USP42Q9H9J4 1324 aaKnown RBP8.47□□□□□ -1.05
PRPF8-204ENST00000572445 COL15A1P39059 1388 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 ANKRD31Q8N7Z5 1873 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 CARMIL3Q8ND23 1372 aa8.47□□□□□ -1.05
PRPF8-204ENST00000572445 TNRC6CQ9HCJ0 1690 aaKnown RBP8.46□□□□□ -1.05
PRPF8-204ENST00000572445 UBR2Q8IWV8 1755 aa8.46□□□□□ -1.05
PRPF8-204ENST00000572445 ZPR1O75312 459 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 RPS6KA4O75676 772 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 AMOTQ4VCS5 1084 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 C16orf71Q8IYS4 520 aaPredicted RBP8.46□□□□□ -1.06
PRPF8-204ENST00000572445 NLGN1Q8N2Q7 840 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 ZBTB3Q9H5J0 574 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 LGR6Q9HBX8 967 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 TFIP11Q9UBB9 837 aaKnown RBP8.46□□□□□ -1.06
PRPF8-204ENST00000572445 ZBTB1Q9Y2K1 713 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 KIF7Q2M1P5 1343 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 SCN7AQ01118 1682 aa8.46□□□□□ -1.06
PRPF8-204ENST00000572445 MRC1P22897 1456 aa8.45□□□□□ -1.06
PRPF8-204ENST00000572445 HOXA2O43364 376 aa8.45□□□□□ -1.06
PRPF8-204ENST00000572445 KDM4AO75164 1064 aa8.45□□□□□ -1.06
PRPF8-204ENST00000572445 NUDT7P0C024 238 aa8.45□□□□□ -1.06
PRPF8-204ENST00000572445 DNAJB2P25686 324 aa8.45□□□□□ -1.06
PRPF8-204ENST00000572445 IL13P35225 146 aa8.45□□□□□ -1.06
PRPF8-204ENST00000572445 DALRD3Q5D0E6 543 aaKnown RBP8.45□□□□□ -1.06
PRPF8-204ENST00000572445 VRTNQ9H8Y1 702 aa8.45□□□□□ -1.06
PRPF8-204ENST00000572445 CEP350Q5VT06 3117 aa8.45□□□□□ -1.06
PRPF8-204ENST00000572445 SIPA1L3O60292 1781 aaPredicted RBP8.44□□□□□ -1.06
PRPF8-204ENST00000572445 NPHP1O15259 732 aa8.44□□□□□ -1.06
PRPF8-204ENST00000572445 RNMTO43148 476 aaKnown RBP8.44□□□□□ -1.06
PRPF8-204ENST00000572445 HMGB2P26583 209 aaKnown RBP8.44□□□□□ -1.06
PRPF8-204ENST00000572445 PIP4K2AP48426 406 aaPredicted RBP8.44□□□□□ -1.06
PRPF8-204ENST00000572445 INTS5Q6P9B9 1019 aaKnown RBP8.44□□□□□ -1.06
PRPF8-204ENST00000572445 RDH13Q8NBN7 331 aa8.44□□□□□ -1.06
PRPF8-204ENST00000572445 SLC52A2Q9HAB3 445 aa8.44□□□□□ -1.06
PRPF8-204ENST00000572445 PIM2Q9P1W9 311 aa8.44□□□□□ -1.06
PRPF8-204ENST00000572445 UNCXA6NJT0 531 aa8.43□□□□□ -1.06
PRPF8-204ENST00000572445 HAX1O00165 279 aa8.43□□□□□ -1.06
PRPF8-204ENST00000572445 POLRMTO00411 1230 aaKnown RBP8.43□□□□□ -1.06
PRPF8-204ENST00000572445 ATG7O95352 703 aa8.43□□□□□ -1.06
PRPF8-204ENST00000572445 FDX1P10109 184 aa8.43□□□□□ -1.06
PRPF8-204ENST00000572445 TGFB2P61812 414 aa8.43□□□□□ -1.06
PRPF8-204ENST00000572445 NFIXQ14938 502 aa8.43□□□□□ -1.06
PRPF8-204ENST00000572445 MTHFSDQ2M296 383 aaKnown RBP8.43□□□□□ -1.06
PRPF8-204ENST00000572445 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
PRPF8-204ENST00000572445 RRAGCQ9HB90 399 aa8.43□□□□□ -1.06
PRPF8-204ENST00000572445 MAFBQ9Y5Q3 323 aaPredicted RBP8.43□□□□□ -1.06
PRPF8-204ENST00000572445 SOS1Q07889 1333 aaPredicted RBP8.43□□□□□ -1.06
PRPF8-204ENST00000572445 BCORQ6W2J9 1755 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms