RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
USP43-203ENST00000570827 PROSER2Q86WR7 435 aaPredicted RBP11.66□□□□□ -0.54
USP43-203ENST00000570827 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
USP43-203ENST00000570827 DNAI1Q9UI46 699 aa11.66□□□□□ -0.54
USP43-203ENST00000570827 ARHGAP31Q2M1Z3 1444 aa11.65□□□□□ -0.54
USP43-203ENST00000570827 CCDC171Q6TFL3 1326 aa11.65□□□□□ -0.54
USP43-203ENST00000570827 KIF20AO95235 890 aa11.65□□□□□ -0.54
USP43-203ENST00000570827 NCBP1Q09161 790 aaKnown RBP11.65□□□□□ -0.54
USP43-203ENST00000570827 CFAP100Q494V2 611 aa11.65□□□□□ -0.54
USP43-203ENST00000570827 OTUD7BQ6GQQ9 843 aa11.65□□□□□ -0.54
USP43-203ENST00000570827 IL17REQ8NFR9 667 aa11.65□□□□□ -0.54
USP43-203ENST00000570827 NCOA5Q9HCD5 579 aaKnown RBP11.65□□□□□ -0.54
USP43-203ENST00000570827 HAND2P61296 217 aa11.65□□□□□ -0.54
USP43-203ENST00000570827 A0A1B0GVL5 298 aa11.65□□□□□ -0.55
USP43-203ENST00000570827 PES1O00541 588 aaKnown RBP11.65□□□□□ -0.55
USP43-203ENST00000570827 DDX58O95786 925 aaKnown RBP11.65□□□□□ -0.55
USP43-203ENST00000570827 ERC1Q8IUD2 1116 aa11.65□□□□□ -0.55
USP43-203ENST00000570827 RAPGEF4Q8WZA2 1011 aa11.65□□□□□ -0.55
USP43-203ENST00000570827 NEK1Q96PY6 1258 aa11.65□□□□□ -0.55
USP43-203ENST00000570827 SLC27A2O14975 620 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 NBPF4Q96M43 638 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 NOL10Q9BSC4 688 aaKnown RBP11.64□□□□□ -0.55
USP43-203ENST00000570827 ANO10Q9NW15 660 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 PHF8Q9UPP1 1060 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 PTPRMP28827 1452 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 ATP10DQ9P241 1426 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 HIP1O00291 1037 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 STX1AQ16623 288 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 FEZ1Q99689 392 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 USP27XA6NNY8 438 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 ERCC6LQ2NKX8 1250 aa11.64□□□□□ -0.55
USP43-203ENST00000570827 ZNF396Q96N95 335 aaPredicted RBP11.64□□□□□ -0.55
USP43-203ENST00000570827 ROBO2Q9HCK4 1378 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 FKBP4Q02790 459 aaKnown RBP eCLIP11.63□□□□□ -0.55
USP43-203ENST00000570827 APOBRQ0VD83 1088 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 ARHGAP29Q52LW3 1261 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 HSP90AB3PQ58FF7 597 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 TMCO3Q6UWJ1 677 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 TTC5Q8N0Z6 440 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 IFNKQ9P0W0 207 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 A0A0D9SFI3 127 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 SLU7O95391 586 aaKnown RBP11.63□□□□□ -0.55
USP43-203ENST00000570827 PROSER3Q2NL68 480 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 CCDC144BQ3MJ40 725 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 TAF7LQ5H9L4 462 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 CCDC144CPQ8IYA2 1237 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 THEMISQ8N1K5 641 aaPredicted RBP11.63□□□□□ -0.55
USP43-203ENST00000570827 ST7Q9NRC1 585 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 ALKQ9UM73 1620 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 RICTORQ6R327 1708 aa11.63□□□□□ -0.55
USP43-203ENST00000570827 CCDC34Q96HJ3 373 aa11.62□□□□□ -0.55
USP43-203ENST00000570827 SEC62Q99442 399 aaKnown RBP11.62□□□□□ -0.55
USP43-203ENST00000570827 RPAP1Q9BWH6 1393 aaPredicted RBP11.62□□□□□ -0.55
USP43-203ENST00000570827 MED14O60244 1454 aa11.62□□□□□ -0.55
USP43-203ENST00000570827 ZNF397Q8NF99 534 aaPredicted RBP11.62□□□□□ -0.55
USP43-203ENST00000570827 SSH3Q8TE77 659 aa11.62□□□□□ -0.55
USP43-203ENST00000570827 CLSTN2Q9H4D0 955 aa11.62□□□□□ -0.55
USP43-203ENST00000570827 ARHGEF28Q8N1W1 1705 aaKnown RBP11.62□□□□□ -0.55
USP43-203ENST00000570827 C11orf57Q6ZUT1 292 aaPredicted RBP11.62□□□□□ -0.55
USP43-203ENST00000570827 PI4K2BQ8TCG2 481 aa11.62□□□□□ -0.55
USP43-203ENST00000570827 MYD88Q99836 296 aa11.62□□□□□ -0.55
USP43-203ENST00000570827 STAP2Q9UGK3 403 aa11.62□□□□□ -0.55
USP43-203ENST00000570827 GOLGB1Q14789 3259 aaKnown RBP11.61□□□□□ -0.55
USP43-203ENST00000570827 PNPLA6Q8IY17 1366 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 MARCKSP29966 332 aaPredicted RBP11.61□□□□□ -0.55
USP43-203ENST00000570827 TLR7Q9NYK1 1049 aaKnown RBP11.61□□□□□ -0.55
USP43-203ENST00000570827 RIMBP3CA6NJZ7 1639 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 RIMBP3BA6NNM3 1639 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 RIMBP3Q9UFD9 1639 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 A2ML1A8K2U0 1454 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 GOLIM4O00461 696 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 UTP14CQ5TAP6 766 aaKnown RBP11.61□□□□□ -0.55
USP43-203ENST00000570827 SPTLC3Q9NUV7 552 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 KIF24Q5T7B8 1368 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 HOXC9P31274 260 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 CCDC82Q8N4S0 544 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 CPLX3Q8WVH0 158 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 TIGD1Q96MW7 591 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 ZBTB3Q9H5J0 574 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 PREX1Q8TCU6 1659 aa11.61□□□□□ -0.55
USP43-203ENST00000570827 CHGBP05060 677 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 RALYLQ86SE5 291 aaKnown RBP11.6□□□□□ -0.55
USP43-203ENST00000570827 TMEM131LA2VDJ0 1609 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 TNRQ92752 1358 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 SLFNL1Q499Z3 407 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 NFXL1Q6ZNB6 911 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 EAF2Q96CJ1 260 aaPredicted RBP11.6□□□□□ -0.55
USP43-203ENST00000570827 ZSWIM6Q9HCJ5 1215 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 CLTCQ00610 1675 aaKnown RBP11.6□□□□□ -0.55
USP43-203ENST00000570827 RPS6KB1P23443 525 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 GPS2Q13227 327 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 UBE3BQ7Z3V4 1068 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 LRRC8AQ8IWT6 810 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 TTC14Q96N46 770 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 BICC1Q9H694 974 aaKnown RBP11.6□□□□□ -0.55
USP43-203ENST00000570827 TAF6LQ9Y6J9 622 aa11.6□□□□□ -0.55
USP43-203ENST00000570827 EDC4Q6P2E9 1401 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms